Escherichia coli RHB23-C05 |
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Putative Escherichia coli RHB23-C05 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,649,721 bp | CP057545 |
| plasmid pRHB23-C05_2: | 118,911 bp | CP057546 |
| plasmid pRHB23-C05_3: | 65,189 bp | CP057547 |
| plasmid pRHB23-C05_7: | 6,836 bp | CP057551 |
REBASE acronym: Eco23C05
Org_num: 43317
All begin HVX95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9010 | IS3 family transposase | |||
| 9015 | R | EhoEh60ORF13695P (100% identity) | Eco23C05ORF9015P | |
| 9020 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1610 | cell division protein DamX | |||
| 1615 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco23C05DamP |
| 1620 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco23C05ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 8735 | phosphohydrolase | |||
| 8740 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.Eco23C05DcmP |
| 8745 | V | V.Ecostr9DcmP (74% identity) | V.Eco23C05DcmP | |
| 8750 | drug/metabolite exporter YedA | |||
| 10735 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco23C05ORF10740P | |
| 10745 | 60 aa hypothetical protein | |||
| 19215 | HNH endonuclease | |||
| 19220 | R | Sso8ORF19860P (100% identity) | Eco23C05ORF19220P | |
| 19225 | IS1-like element IS1A family transposase | |||
| plasmid pRHB23-C05_2 | ||||
| 22475 | 103 aa hypothetical protein | |||
| 22480 | M | M.SspPIBORF23080P (100% identity) | M.Eco23C05ORF22480P | |
| 22485 | 73 aa hypothetical protein | |||
| plasmid pRHB23-C05_3 | ||||
| 22930 | 97 aa hypothetical protein | |||
| 22935 | M | M.Sen4261ORF1090P (100% identity) | M.Eco23C05ORF22935P | |
| 22940 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB23-C05_7 | ||||
| 23880 | M | M.SenS089ORF25085P (100% identity) | M.Eco23C05ORF23880P | |
| 23885 | Rop family plasmid primer RNA-binding protein | |||
| 23875 | R | SenSO21ORF25170P (100% identity) | Eco23C05ORF23880P | |