Escherichia coli RHB23-C10 |
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Putative Escherichia coli RHB23-C10 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,651,138 bp | CP057525 |
| plasmid pRHB23-C10_2: | 118,911 bp | CP057526 |
| plasmid pRHB23-C10_3: | 65,179 bp | CP057527 |
| plasmid pRHB23-C10_7: | 6,836 bp | CP057531 |
REBASE acronym: Eco23C10
Org_num: 43320
All begin HVX98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9005 | IS3 family transposase | |||
| 9010 | R | EhoEh60ORF13695P (100% identity) | Eco23C10ORF9010P | |
| 9015 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1605 | cell division protein DamX | |||
| 1610 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco23C10DamP |
| 1615 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco23C10ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 8730 | phosphohydrolase | |||
| 8735 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.Eco23C10DcmP |
| 8740 | V | V.Ecostr9DcmP (74% identity) | V.Eco23C10DcmP | |
| 8745 | drug/metabolite exporter YedA | |||
| 10730 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco23C10ORF10735P | |
| 10740 | 60 aa hypothetical protein | |||
| 19220 | HNH endonuclease | |||
| 19225 | R | Sso8ORF19860P (100% identity) | Eco23C10ORF19225P | |
| 19230 | IS1-like element IS1A family transposase | |||
| plasmid pRHB23-C10_2 | ||||
| 22480 | 103 aa hypothetical protein | |||
| 22485 | M | M.SspPIBORF23080P (100% identity) | M.Eco23C10ORF22485P | |
| 22490 | 73 aa hypothetical protein | |||
| plasmid pRHB23-C10_3 | ||||
| 22935 | 97 aa hypothetical protein | |||
| 22940 | M | M.Sen4261ORF1090P (100% identity) | M.Eco23C10ORF22940P | |
| 22945 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB23-C10_7 | ||||
| 23880 | R | SenSO21ORF25170P (100% identity) | Eco23C10ORF23875P | |
| 23885 | Rop family plasmid primer RNA-binding protein | |||
| 23875 | M | M.SenS089ORF25085P (100% identity) | M.Eco23C10ORF23875P | |