Escherichia coli RHB25-C19 |
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Putative Escherichia coli RHB25-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,048,292 bp | CP057470 |
| plasmid pRHB25-C19_2: | 87,656 bp | CP057471 |
REBASE acronym: Eco25C19
Org_num: 43075
All begin HVY24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12025 | 322 aa hypothetical protein | |||
| 12030 | R | SspS13ORF3945P (100% identity) | Eco25C19ORF12035P | |
| 12035 | M | M.EcoRM9088ORF13950P (100% identity) | M.Eco25C19ORF12035P | |
| 12040 | S | S.Eco34C16ORF11740P (100% identity) | S.Eco25C19ORF12035P | |
| 12045 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 595 | phosphohydrolase | |||
| 600 | M | M.Eco34C16DcmP (100% identity) | CCWGG | M.Eco25C19DcmP |
| 605 | V | V.SsoSE61DcmP (100% identity) | V.Eco25C19DcmP | |
| 610 | drug/metabolite exporter YedA | |||
| 6515 | 92 aa hypothetical protein | |||
| 6520 | M | M.EcoW26ORF35400P (100% identity) | M.Eco25C19ORF6520P | |
| 6525 | TrmB family transcriptional regulator | |||
| 12235 | HNH endonuclease | |||
| 12240 | R | SflFF17ORF19275P (100% identity) | Eco25C19ORF12240P | |
| 12245 | 59 aa hypothetical protein | |||
| 12360 | AAA family ATPase | |||
| 12365 | M | M.EcoKG10ORF22085P (100% identity) | M.Eco25C19ORF12365P | |
| 12370 | integrase arm-type DNA-binding domain-containing | |||
| 13685 | LexA family transcriptional regulator | |||
| 13690 | M | M.EcoPC1ORF12985P (100% identity) | GATC | M.Eco25C19ORF13690P |
| 13695 | PerC family transcriptional regulator | |||
| 17570 | cell division protein DamX | |||
| 17575 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco25C19DamP |
| 17580 | ribulose-phosphate 3-epimerase | |||
| 18085 | DUF2556 family protein | |||
| 18090 | M | M.Eco34C16ORF17525P (100% identity) | ATGCAT | M.Eco25C19ORF18090P |
| 18095 | DNA-binding transcriptional regulator Fis | |||
| 20190 | helix-turn-helix transcriptional regulator | |||
| 20195 | R | EcoC09ORF10175P (100% identity) | GCWGC | Eco25C19ORF20195P |
| 20200 | 536 aa hypothetical protein | |||
| 21330 | adhesin-like autotransporter YpjA/EhaD | |||
| 21335 | R | Sens24184ORF5380P (100% identity) | C | Eco25C19ORF21335P |
| 21340 | DNA primase | |||
| plasmid pRHB25-C19_2 | ||||
| 24665 | 73 aa hypothetical protein | |||
| 24670 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco25C19ORF24670P | |
| 24675 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12350 | AAA family ATPase | |||
| 12355 | R | KaeRX71McrCP (99% identity) | Eco25C19McrCP | |
| 12360 | R | KaeRX71McrBP (99% identity) | Eco25C19McrBP | |
| 12365 | DNA cytosine methyltransferase | |||