Escherichia coli RHB26-C12 |
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Putative Escherichia coli RHB26-C12 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,460 bp | CP057455 |
| plasmid pRHB26-C12_2: | 95,109 bp | CP057456 |
REBASE acronym: Eco26C12
Org_num: 43078
All begin HVY31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20875 | 322 aa hypothetical protein | |||
| 20880 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco26C12ORF20885P |
| 20885 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco26C12ORF20885P |
| 20890 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco26C12ORF20885P |
| 20895 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco26C12DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco26C12ORF2280P |
| 2285 | tyrosine-type recombinase/integrase | |||
| 5935 | Com family DNA-binding transcriptional | |||
| 5940 | M | M.EcoH22ORF6530P (100% identity) | M.Eco26C12ORF5940P | |
| 5945 | ribosome-associated translation inhibitor RaiA | |||
| 8155 | conserved phage C-terminal domain-containing | |||
| 8160 | M | M.EcoR68ORF7125P (99% identity) | M.Eco26C12ORF8160P | |
| 8165 | phage antirepressor KilAC domain-containing | |||
| 9555 | phosphohydrolase | |||
| 9560 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.Eco26C12DcmP |
| 9565 | V | V.SflFF64DcmP (100% identity) | V.Eco26C12DcmP | |
| 9570 | drug/metabolite exporter YedA | |||
| 11595 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco26C12ORF11600P | |
| 11605 | 60 aa hypothetical protein | |||
| 14290 | DUF1367 family protein | |||
| 14295 | R | EcosEC21ORF11865P (100% identity) | Eco26C12ORF14300P | |
| 14300 | M | M.Eco26C20ORF5535P (100% identity) | M.Eco26C12ORF14300P | |
| 14305 | DUF977 family protein | |||
| 17415 | LexA family transcriptional regulator | |||
| 17420 | M | M.EcoNIH1ORF1465P (100% identity) | GATC | M.Eco26C12ORF17420P |
| 17425 | PerC family transcriptional regulator | |||
| 19035 | phage holin, lambda family | |||
| 19040 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco26C12ORF19040P | |
| 19045 | 67 aa hypothetical protein | |||
| 21070 | sialate O-acetylesterase | |||
| 21075 | R | SflFF16ORF19630P (100% identity) | Eco26C12ORF21075P | |
| 21080 | IS3 family transposase | |||
| 21095 | restriction endonuclease | |||
| 21100 | M | M.SflWW1ORF19920P (100% identity) | M.Eco26C12ORF21100P | |
| 21105 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pRHB26-C12_2 | ||||
| 24425 | 73 aa hypothetical protein | |||
| 24430 | M | M.SflN92ORF24820P (98% identity) | M.Eco26C12ORF24430P | |
| 24435 | 101 aa hypothetical protein | |||