Prevotella scopos 361B |
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Putative Prevotella scopos 361B RM systems
Ref: Carlson et al. unpublished
REBASE ref # 31012
| Sequence length: | GenBank #: | |
| Chromosome: | 764,699 bp | NEBC15735 |
| Chromosome: | 2,885,772 bp | NEBC15736 |
REBASE acronym: Psc361B
Org_num: 43043
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| From PmPmel361B.fasta | ||||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 1579 | 102 aa hypothetical protein | |||
| 1580 | S | S4.Pme0300IIIP (90% identity) | S3.Psc361BIP | |
| 1581 | Integrase/recombinase | |||
| 1582 | 109 aa hypothetical protein | |||
| 1583 | S | S3.Pin1779ORF4645P (66% identity) | S2.Psc361BIP | |
| 1585 | S | S1.Pme760ORF3585P (66% identity) | CCAYNNNNNNNTTC | S1.Psc361BI |
| 1586 | M | M.Pme760ORF3585P (97% identity) | CCAYNNNNNNNTTC | M.Psc361BI |
| 1588 | R | Pme760ORF3585P (97% identity) | CCAYNNNNNNNTTC | Psc361BIP |
| 1592 | 70 aa hypothetical protein | |||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 1904 | MBL fold metallo-hydrolase | |||
| ??? | M | M.Pme0091ORF2685P (98% identity) | M.Psc361BORFAP | |
| 1910 | 88 aa hypothetical protein CVT99_04705 | |||
| 1912 | S | S.Ean353ORF968P (34% identity) | S1.Psc361BORFAP | |
| 1914 | S | S2.Pni630ORF9505P (79% identity) | S2.Psc361BORFAP | |
| 1915 | 74 aa hypothetical protein | |||
| 1916 | four helix bundle protein | |||
| 1917 | 67 aa hypothetical protein | |||
| 1918 | 68 aa hypothetical protein | |||
| 1919 | R | Pme0054ORF13010P (97% identity) | Psc361BORFAP | |
| 1922 | efflux transporter, outer membrane factor lipoprotein, NodT family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| From PmPmel361B.fasta | ||||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 1735 | folylpolyglutamate synthase | |||
| 1737 | M | M.Pme0091ORF2905P (99% identity) | TTCGAA | M.Psc361BII |
| 1738 | R | Pme0091ORF2905P (100% identity) | TTCGAA | Psc361BIIP |
| 1741 | C | C.Pme0091ORF2905P (100% identity) | C.Psc361BIIP | |
| 1742 | 60 aa hypothetical protein | |||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 2383 | 81 aa hypothetical protein | |||
| 2384 | M | M.Pme0054I (99% identity) | CTRYAG | M.Psc361BIII |
| 2385 | R | Pme0054IP (99% identity) | CTRYAG | Psc361BIIIP |
| 2386 | 63 aa hypothetical protein | |||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 4983 | 80 aa hypothetical protein HMPREF3202_01911 | |||
| 4984 | M | M.Psc361BORFGP (100% identity) | M.Psc361BORFFP | |
| 4985 | thymidylate synthase | |||
| scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
| 5144 | 66 aa hypothetical protein | |||
| 5145 | M | M.Psc361BORFFP (100% identity) | M.Psc361BORFGP | |
| 5146 | thymidylate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| From PmPmel361B.fasta | ||||
| scf7180000000009-quiver | ||||
| 186 | 84 aa hypothetical protein | |||
| 187 | M | M.PhiF0411I (92% identity) | CGGTA | M.Psc361BIV |
| 191 | R | PhiF0411IP (91% identity) | CGGTA | Psc361BIVP |
| 192 | TIGR02391 family protein | |||