Escherichia coli RHB31-C18 |
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Putative Escherichia coli RHB31-C18 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,069,949 bp | CP057254 |
| plasmid pRHB31-C18_2: | 105,702 bp | CP057255 |
REBASE acronym: Eco31C18
Org_num: 43120
All begin HVY92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18725 | endoribonuclease SymE | |||
| 18730 | S | S.Ema777ORF2985P (35% identity) | S2.Eco31C18ORF18740P | |
| 18735 | S | S.SspS13ORF3945P (65% identity) | S1.Eco31C18ORF18740P | |
| 18740 | M | M.SspS13ORF3945P (100% identity) | M.Eco31C18ORF18740P | |
| 18745 | R | EcoXH993ORF23720P (100% identity) | Eco31C18ORF18740P | |
| 18750 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6035 | drug/metabolite exporter YedA | |||
| 6040 | V | V.SsoSE61DcmP (100% identity) | V.Eco31C18DcmP | |
| 6045 | M | M.Eco34C16DcmP (100% identity) | CCWGG | M.Eco31C18DcmP |
| 6050 | phosphohydrolase | |||
| 13215 | DNA-binding transcriptional regulator Fis | |||
| 13220 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco31C18ORF13220P |
| 13225 | DUF2556 family protein | |||
| 13815 | ribulose-phosphate 3-epimerase | |||
| 13820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco31C18DamP |
| 13825 | cell division protein DamX | |||
| 18475 | 59 aa hypothetical protein | |||
| 18480 | R | EcoRG065ORF11765P (100% identity) | Eco31C18ORF18480P | |
| 18485 | N-acetylneuraminic acid mutarotase | |||
| 18515 | DEAD/DEAH box helicase | |||
| 18520 | RM | Eco42405ORF21370P (98% identity) | Eco31C18ORF18520P | |
| 23645 | TraR/DksA family transcriptional regulator | |||
| 23650 | M | M.EcoTO6ORF3189P (98% identity) | GATC | M.Eco31C18ORF23650P |
| 23655 | replication endonuclease | |||
| plasmid pRHB31-C18_2 | ||||
| 24570 | 73 aa hypothetical protein | |||
| 24575 | M | M.SflN92ORF24820P (100% identity) | M.Eco31C18ORF24575P | |
| 24580 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1930 | site-specific DNA recombinase | |||
| 1935 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco31C18ORF1935P |
| 1940 | isocitrate dehydrogenase | |||