Escherichia coli RHB35-C23 |
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Putative Escherichia coli RHB35-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,687,211 bp | CP057144 |
| plasmid pRHB35-C23_2: | 81,202 bp | CP057145 |
REBASE acronym: Eco35C23
Org_num: 43147
All begin HVZ41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19305 | DUF4942 domain-containing protein | |||
| 19310 | M | M.SflN110ORF19045P (100% identity) | M.Eco35C23ORF19310P | |
| 19315 | S | S.SflN110ORF19045P (59% identity) | S1.Eco35C23ORF19310P | |
| 19320 | S | S.EcoWI2ORF3972P (39% identity) | S2.Eco35C23ORF19310P | |
| 19325 | R | SflN110ORF19045P (100% identity) | Eco35C23ORF19310P | |
| 19330 | 52 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35C23DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco35C23ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 8655 | phosphohydrolase | |||
| 8660 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco35C23DcmP |
| 8665 | V | V.SsoSE61DcmP (100% identity) | V.Eco35C23DcmP | |
| 8670 | drug/metabolite exporter YedA | |||
| 10660 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco35C23ORF10665P | |
| 10670 | IS66-like element ISEc22 family transposase | |||
| 14540 | replication endonuclease | |||
| 14545 | M | M.Sen663ORF16605P (99% identity) | GATC | M.Eco35C23ORF14545P |
| 14550 | TraR/DksA family transcriptional regulator | |||
| 19285 | HNH endonuclease | |||
| 19290 | R | SflSTLE4ORF19250P (100% identity) | Eco35C23ORF19290P | |
| 19295 | McrC family protein | |||
| plasmid pRHB35-C23_2 | ||||
| 22695 | 97 aa hypothetical protein | |||
| 22700 | M | M.Xca80ORFEP (100% identity) | M.Eco35C23ORF22700P | |
| 22705 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19290 | HNH endonuclease | |||
| 19295 | R | SflSTLE4McrCP (100% identity) | Eco35C23McrCP | |
| 19300 | R | SflSTLE4McrBP (100% identity) | Eco35C23McrBP | |
| 19305 | DUF4942 domain-containing protein | |||