Escherichia coli RHB39-C18 |
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Putative Escherichia coli RHB39-C18 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,670,886 bp | CP057055 |
| plasmid pRHB39-C18_2: | 96,046 bp | CP057056 |
REBASE acronym: Eco39C18
Org_num: 43166
All begin HVZ85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19875 | IS1 family transposase | |||
| 19880 | R | EcoXJ62ORF5350P (100% identity) | Eco39C18ORF19890P | |
| 19885 | S | S.Eco9104I (100% identity) | S.Eco39C18ORF19890P | |
| 19890 | M | M.EcoXJ62ORF5350P (100% identity) | M.Eco39C18ORF19890P | |
| 19895 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 775 | phosphohydrolase | |||
| 780 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco39C18DcmP |
| 785 | V | V.SdySWHE2DcmP (99% identity) | V.Eco39C18DcmP | |
| 790 | drug/metabolite exporter YedA | |||
| 2735 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco39C18ORF2740P | |
| 2745 | 60 aa hypothetical protein | |||
| 16270 | cell division protein DamX | |||
| 16275 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco39C18DamP |
| 16280 | ribulose-phosphate 3-epimerase | |||
| 16910 | DUF2556 family protein | |||
| 16915 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco39C18ORF16915P |
| 16920 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB39-C18_2 | ||||
| 22990 | RM | Eco557ORF69P (100% identity) | Eco39C18ORF22990P | |
| 22995 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11395 | GTPase | |||
| 11400 | R | Ssp28760MrrP (84% identity) | Eco39C18MrrP | |
| 11405 | 298 aa hypothetical protein | |||