Escherichia coli RHB40-C03 |
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Putative Escherichia coli RHB40-C03 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,927,124 bp
GenBank #: CP057028
REBASE acronym: Eco40C03
Org_num: 43172
All begin HVZ92_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 650 | TrmB family transcriptional regulator | |||
| 655 | M | M.EcoC9964ORF1930P (100% identity) | M.Eco40C03ORF655P | |
| 660 | 92 aa hypothetical protein | |||
| 2340 | TrmB family transcriptional regulator | |||
| 2345 | M | M.Eco11911ORF1960P (100% identity) | M.Eco40C03ORF2345P | |
| 2355 | holin | |||
| 6095 | holin | |||
| 6105 | M | M.EcoP8ORF13690P (100% identity) | M.Eco40C03ORF6105P | |
| 6110 | TrmB family transcriptional regulator | |||
| 6670 | drug/metabolite exporter YedA | |||
| 6675 | V | V.SsoSE61DcmP (100% identity) | V.Eco40C03DcmP | |
| 6680 | M | M.Eco36C16DcmP (100% identity) | CCWGG | M.Eco40C03DcmP |
| 6685 | phosphohydrolase | |||
| 11505 | 536 aa hypothetical protein | |||
| 11510 | R | KpnSB611ORF4590P (100% identity) | GCWGC | Eco40C03ORF11510P |
| 11515 | helix-turn-helix transcriptional regulator | |||
| 13640 | DNA-binding transcriptional regulator Fis | |||
| 13645 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco40C03ORF13645P |
| 13650 | DUF2556 family protein | |||
| 14195 | ribulose-phosphate 3-epimerase | |||
| 14200 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco40C03DamP |
| 14205 | cell division protein DamX | |||
| 19055 | AAA family ATPase | |||
| 19060 | R | Eco09C23ORF18640P (100% identity) | Eco40C03ORF19060P | |
| 19065 | sialate O-acetylesterase | |||
| 20890 | PerC family transcriptional regulator | |||
| 20895 | M | M.Eco13bORF17665P (100% identity) | GATC | M.Eco40C03ORF20895P |
| 20900 | LexA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15640 | 0 aa hypothetical protein | |||
| 15645 | R | SflFF17ORF4015P (100% identity) | GTCTC | Eco40C03ORF15650P |
| 15650 | M | M.SflFF17ORF4015P (100% identity) | GTCTC | M.Eco40C03ORF15650P |
| 15655 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19045 | integrase | |||
| 19050 | R | EcoWMcrCP (34% identity) | Eco40C03McrCP | |
| 19055 | R | Eco35C14McrBP (100% identity) | Eco40C03McrBP | |
| 19060 | HNH endonuclease | |||