Escherichia coli RHB41-C01 |
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Putative Escherichia coli RHB41-C01 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,611,954 bp | CP057007 |
| plasmid pRHB41-C01_2: | 223,412 bp | CP057008 |
REBASE acronym: Eco41C01
Org_num: 43182
All begin HV003_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1580 | cell division protein DamX | |||
| 1585 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco41C01DamP |
| 1590 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco41C01ORF2210P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 8525 | phosphohydrolase | |||
| 8530 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco41C01DcmP |
| 8535 | V | V.SsoSE61DcmP (100% identity) | V.Eco41C01DcmP | |
| 8540 | drug/metabolite exporter YedA | |||
| 10520 | IS66 family transposase | |||
| 10525 | M | M.EcoI105ORF10780P (100% identity) | M.Eco41C01ORF10525P | |
| 10530 | IS66 family insertion sequence element accessory | |||
| 17055 | LexA family transcriptional regulator | |||
| 17060 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco41C01ORF17060P |
| 17065 | PerC family transcriptional regulator | |||
| 18935 | RM | Fnu048ORFEP (100% identity) | Eco41C01ORF18935P | |
| 18940 | DEAD/DEAH box helicase | |||
| 18990 | HNH endonuclease | |||
| 18995 | R | Fnu048ORFUP (96% identity) | Eco41C01ORF18995P | |
| 19000 | 59 aa hypothetical protein | |||
| plasmid pRHB41-C01_2 | ||||
| 22675 | 55 aa hypothetical protein | |||
| 22680 | M | M.YpsF1ORFCP (100% identity) | M.Eco41C01ORF22680P | |
| 22685 | thermonuclease family protein | |||
| 23180 | 48 aa hypothetical protein | |||
| 23185 | M | M.YpsF1ORFBP (100% identity) | M.Eco41C01ORF23185P | |
| 23190 | 202 aa hypothetical protein | |||
| 23310 | DNA-binding protein | |||
| 23315 | M | M.YpsF1ORFDP (100% identity) | M.Eco41C01ORF23315P | |
| 23320 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16945 | IS3-like element IS2 family transposase | |||
| 16950 | R | Ecop10BGmrSDP (99% identity) | Eco41C01GmrSDP | |
| 16955 | integrase | |||