Escherichia coli RHBSTW-00072 |
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Putative Escherichia coli RHBSTW-00072 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,206,684 bp | CP056876 |
| plasmid pRHBSTW-00072_2: | 157,437 bp | CP056877 |
REBASE acronym: EcoW072
Org_num: 43198
All begin HV055_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20655 | restriction endonuclease | |||
| 20660 | M | M.EcoV7ORF19545P (99% identity) | GGYANNNNNGTNG | M.EcoW072ORF20660P |
| 20665 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoW072ORF20660P |
| 20670 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoW072ORF20660P |
| 20675 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 545 | integrase | |||
| 550 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoW072ORF550P |
| 555 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoW072ORF550P |
| 560 | transposase | |||
| 2060 | cell division protein DamX | |||
| 2065 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW072DamP |
| 2070 | ribulose-phosphate 3-epimerase | |||
| 2660 | DUF2556 family protein | |||
| 2665 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoW072ORF2665P |
| 2670 | DNA-binding transcriptional regulator Fis | |||
| 10040 | phosphohydrolase | |||
| 10045 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoW072DcmP |
| 10050 | V | V.EcosC25DcmP (100% identity) | V.EcoW072DcmP | |
| 10055 | drug/metabolite exporter YedA | |||
| 16920 | 71 aa hypothetical protein | |||
| 16925 | M | M.Sen21974ORF23385P (100% identity) | M.EcoW072ORF16925P | |
| 16930 | 145 aa hypothetical protein | |||
| 20450 | RusA family crossover junction | |||
| 20455 | M | M.Sen24770ORF310P (100% identity) | GATC | M.EcoW072ORF20455P |
| 20460 | 331 aa hypothetical protein | |||
| 21200 | conjugal transfer protein TraG N-terminal | |||
| 21205 | M | M.EcosS3ORF15775P (100% identity) | M.EcoW072ORF21205P | |
| 21210 | R | EcosS3ORF15775P (100% identity) | EcoW072ORF21205P | |
| 21215 | 555 aa hypothetical protein | |||
| plasmid pRHBSTW-00072_2 | ||||
| 25360 | 73 aa hypothetical protein | |||
| 25365 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoW072ORF25365P |
| 25370 | 102 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13840 | NinE family protein | |||
| 13845 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoW072ORF13845P |
| 13850 | recombination protein NinB | |||