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Putative Escherichia coli RHBSTW-00082 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,248,010 bp | CP056870 |
plasmid pRHBSTW-00082_2: | 92,934 bp | CP056871 |
plasmid pRHBSTW-00082_3: | 72,712 bp | CP056872 |
REBASE acronym: EcoW082
Org_num: 43200
All begin HV058_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13520 | type II toxin-antitoxin system RelB/DinJ family | |||
13525 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoW082ORF13525P |
13530 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoW082ORF13525P |
13535 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoW082ORF13525P |
13540 | 184 aa hypothetical protein | |||
18060 | endoribonuclease SymE | |||
18065 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoW082ORF18075P |
18070 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoW082ORF18075P |
18075 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoW082ORF18075P |
18080 | restriction endonuclease | |||
19880 | ash family protein | |||
19885 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoW082ORF19890P |
19890 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoW082ORF19890P |
19895 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoW082ORF19890P |
19900 | type IV toxin-antitoxin system AbiEi family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2865 | DUF262 domain-containing protein | |||
2870 | R | R2.EcosS3ORF2905P (100% identity) | EcoW082ORF2875P | |
2875 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoW082ORF2875P | |
2880 | antitermination protein | |||
3735 | drug/metabolite exporter YedA | |||
3740 | V | V.SflC32DcmP (74% identity) | V.EcoW082DcmP | |
3745 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoW082DcmP |
3750 | phosphohydrolase | |||
7195 | PerC family transcriptional regulator | |||
7200 | M | M.EcoW081ORF7185P (100% identity) | M.EcoW082ORF7200P | |
7205 | DUF1382 family protein | |||
11425 | DNA-binding transcriptional regulator Fis | |||
11430 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoW082ORF11430P |
11435 | DUF2556 family protein | |||
12025 | ribulose-phosphate 3-epimerase | |||
12030 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW082DamP |
12035 | cell division protein DamX | |||
16705 | conjugal transfer protein TraG N-terminal | |||
16710 | M | M.EcosS3ORF15775P (100% identity) | M.EcoW082ORF16710P | |
16715 | R | EcosS3ORF15775P (100% identity) | EcoW082ORF16710P | |
16720 | 555 aa hypothetical protein | |||
23340 | 71 aa hypothetical protein | |||
23345 | M | M.KpnYN1ORFGP (89% identity) | M.EcoW082ORF23345P | |
23350 | helix-turn-helix transcriptional regulator | |||
25600 | TrmB family transcriptional regulator | |||
25605 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoW082ORF25605P |
25620 | DUF3927 family protein | |||
plasmid pRHBSTW-00082_2 | ||||
26115 | 73 aa hypothetical protein | |||
26120 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoW082ORF26120P | |
26125 | 102 aa hypothetical protein | |||
plasmid pRHBSTW-00082_3 | ||||
26330 | 103 aa hypothetical protein | |||
26335 | M | M.EcoW081ORF26305P (100% identity) | M.EcoW082ORF26335P | |
26340 | 73 aa hypothetical protein |