Citrobacter species RHBSTW-00107 |
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Putative Citrobacter species RHBSTW-00107 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,087,383 bp | CP056861 |
| plasmid pRHBSTW-00107_2: | 281,677 bp | CP056862 |
REBASE acronym: Csp0107
Org_num: 43065
All begin HV072_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5425 | IS1 family transposase | |||
| 5430 | R | EcoCP83ORF15500P (100% identity) | Csp0107ORF5440P | |
| 5435 | S | S.Csp859ORF5410P (100% identity) | S.Csp0107ORF5440P | |
| 5440 | M | M.Csp859ORF5410P (100% identity) | M.Csp0107ORF5440P | |
| 5445 | transposase | |||
| 21290 | 222 aa hypothetical protein | |||
| 21295 | R | Csp859ORF21265AP (100% identity) | Csp0107ORF21315P | |
| 21300 | IS630-like element ISEc33 family transposase | |||
| 21305 | type I restriction endonuclease subunit R | |||
| 21310 | S | S.Csp859ORF21265P (100% identity) | S.Csp0107ORF21315P | |
| 21315 | M | M2.Csp859ORF21265P (100% identity) | M2.Csp0107ORF21315P | |
| 21320 | M | M1.Csp859ORF21265P (100% identity) | M1.Csp0107ORF21315P | |
| 21325 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp0107DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.Csp859ORF2305P (100% identity) | ATGCAT | M.Csp0107ORF2315P |
| 2320 | site-specific integrase | |||
| 7435 | DUF4222 domain-containing protein | |||
| 7440 | M | M.Csp859ORF7400P (100% identity) | M.Csp0107ORF7440P | |
| 7445 | TraR/DksA family transcriptional regulator | |||
| 9765 | phosphohydrolase | |||
| 9770 | M | M.Csp859ORF9725P (100% identity) | CCWGG | M.Csp0107ORF9770P |
| 9775 | V | V.Csp859ORF9725P (100% identity) | V.Csp0107ORF9770P | |
| 9780 | drug/metabolite exporter YedA | |||
| 14735 | 59 aa hypothetical protein | |||
| 14740 | M | M.Csp859ORF14695P (100% identity) | M.Csp0107ORF14740P | |
| 14745 | 85 aa hypothetical protein | |||
| 19485 | DUF1317 family protein | |||
| ??? | M | M.Csp859ORF19440P (100% identity) | M.Csp0107ORF19490P | |
| 19495 | DUF4060 family protein | |||
| 22965 | phage holin family protein | |||
| 22970 | M | M.Csp859ORF23300P (100% identity) | M.Csp0107ORF22970P | |
| 22975 | 71 aa hypothetical protein | |||
| 23010 | RusA family crossover junction | |||
| 23015 | M | M1.Csp859ORF23345P (100% identity) | M1.Csp0107ORF23015P | |
| 23020 | M | M2.Csp859ORF23345P (100% identity) | M2.Csp0107ORF23015P | |
| 23025 | conserved phage C-terminal domain-containing | |||
| 24205 | 197 aa hypothetical protein | |||
| 24210 | M | M.Csp859ORF24535P (100% identity) | M.Csp0107ORF24210P | |
| 24215 | replication endonuclease | |||
| 24215 | replication endonuclease | |||
| 24220 | M | M1.Csp859ORF24545P (100% identity) | M1.Csp0107ORF24220P | |
| 24225 | 65 aa hypothetical protein | |||
| 24230 | M | M2.Csp859ORF24545P (100% identity) | M2.Csp0107ORF24220P | |
| 24235 | 3-5 exonuclease | |||
| plasmid pRHBSTW-00107_2 | ||||
| 26135 | DNA polymerase III subunit beta | |||
| 26140 | M | M.Sen3039ORF24445P (100% identity) | M.Csp0107ORF26140P | |
| 26145 | 76 aa hypothetical protein | |||