Escherichia coli RHBSTW-00180 |
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Putative Escherichia coli RHBSTW-00180 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,790,247 bp | CP056786 |
| plasmid pRHBSTW-00180_2: | 167,752 bp | CP056787 |
| plasmid pRHBSTW-00180_3: | 111,310 bp | CP056788 |
REBASE acronym: Eco0180
Org_num: 43019
All begin HV111_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19435 | DUF4942 domain-containing protein | |||
| 19440 | M | M.SflN110ORF19045P (100% identity) | M.Eco0180ORF19440P | |
| 19445 | S | S.SflN110ORF19045P (59% identity) | S1.Eco0180ORF19440P | |
| 19450 | S | S.EcoWI2ORF3972P (39% identity) | S2.Eco0180ORF19440P | |
| 19455 | R | SflN110ORF19045P (100% identity) | Eco0180ORF19440P | |
| 19460 | 52 aa hypothetical protein | |||
| plasmid pRHBSTW-00180_3 | ||||
| 24525 | DNA polymerase III subunit theta | |||
| 24530 | M | M.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | M.Eco0180ORF24530P |
| 24535 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.Eco0180ORF24530P |
| 24540 | R | EcoMY18ORF24050P (100% identity) | GAANNNNNNTAYG | Eco0180ORF24530P |
| 24545 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0180DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco0180ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 8865 | phosphohydrolase | |||
| 8870 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco0180DcmP |
| 8875 | V | V.SflSTLE1DcmP (100% identity) | V.Eco0180DcmP | |
| 8880 | drug/metabolite exporter YedA | |||
| 10880 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0180ORF10885P | |
| 10890 | IS66-like element ISEc22 family transposase | |||
| 12720 | DUF3927 family protein | |||
| 12735 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco0180ORF12735P |
| 12740 | TrmB family transcriptional regulator | |||
| 19415 | HNH endonuclease | |||
| 19420 | R | SflSTLE4ORF19250P (100% identity) | Eco0180ORF19420P | |
| 19425 | McrC family protein | |||
| 19780 | sigma 54-interacting transcriptional regulator | |||
| 19785 | R | SflFF87ORF20150P (100% identity) | Eco0180ORF19785P | |
| 19790 | IS21-like element IS100 family transposase | |||
| plasmid pRHBSTW-00180_2 | ||||
| 23885 | 73 aa hypothetical protein | |||
| 23890 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco0180ORF23890P | |
| 23895 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19420 | HNH endonuclease | |||
| 19425 | R | SflSTLE4McrCP (100% identity) | Eco0180McrCP | |
| 19430 | R | SflSTLE4McrBP (100% identity) | Eco0180McrBP | |
| 19435 | DUF4942 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHBSTW-00180_3 | ||||
| 24585 | 76 aa hypothetical protein | |||
| 24590 | M | M.Sso524ORF460P (100% identity) | M.Eco0180ORF24590P | |
| 24595 | 269 aa hypothetical protein | |||