Escherichia coli RHBSTW-00312 |
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Putative Escherichia coli RHBSTW-00312 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,946,750 bp | CP056620 |
| plasmid pRHBSTW-00312_2: | 96,659 bp | CP056621 |
REBASE acronym: Eco312
Org_num: 43022
All begin HV152_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco312DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco312ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 5745 | PerC family transcriptional regulator | |||
| 5750 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco312ORF5750P |
| 5755 | LexA family transcriptional regulator | |||
| 9570 | phosphohydrolase | |||
| 9575 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco312DcmP |
| 9580 | V | V.EcosPA11DcmP (100% identity) | V.Eco312DcmP | |
| 9585 | drug/metabolite exporter YedA | |||
| 14065 | LexA family transcriptional regulator | |||
| 14070 | M | M.EcofEC1ORF8685P (100% identity) | GATC | M.Eco312ORF14070P |
| 14075 | PerC family transcriptional regulator | |||
| 20190 | RM | Fnu048ORFEP (100% identity) | Eco312ORF20190P | |
| 20195 | DEAD/DEAH box helicase | |||
| 20235 | HNH endonuclease | |||
| 20240 | R | Fnu048ORFUP (96% identity) | Eco312ORF20240P | |
| 20245 | 59 aa hypothetical protein | |||
| 20395 | osmoprotectant transport activator ProQ | |||
| 20400 | M | M.SflFF24DndBP (100% identity) | M.Eco312DndBP | |
| 20405 | DNA phosphorothioation system sulfurtransferase | |||
| 20400 | DNA sulfur modification protein DndB | |||
| 20405 | M | M.SflFF24DndCP (100% identity) | M.Eco312DndCP | |
| 20410 | DNA sulfur modification protein DndD | |||
| 20405 | DNA phosphorothioation system sulfurtransferase | |||
| 20410 | M | M.SflFF24DndDP (100% identity) | M.Eco312DndDP | |
| 20415 | DNA sulfur modification protein DndE | |||
| 20410 | DNA sulfur modification protein DndD | |||
| 20415 | M | M.SflFF24DndEP (100% identity) | M.Eco312DndEP | |
| 20420 | DGQHR domain-containing protein | |||
| 20430 | accessory gene regulator B family protein | |||
| 20435 | R | EcotcmA3DptHP (100% identity) | Eco312DptHP | |
| 20440 | DNA phosphorothioation-dependent restriction | |||
| 20435 | DNA phosphorothioation-dependent restriction | |||
| 20440 | R | SflFF24DptGP (100% identity) | Eco312DptGP | |
| 20445 | DNA phosphorothioation-dependent restriction | |||
| 20440 | DNA phosphorothioation-dependent restriction | |||
| 20445 | R | SflFF24DptFP (100% identity) | Eco312DptFP | |
| 20450 | porin family protein | |||
| plasmid pRHBSTW-00312_2 | ||||
| 23930 | tellurite/colicin resistance protein | |||
| 23945 | M | M.Eco127AORF26950P (99% identity) | M.Eco312ORF23945P | |
| 23950 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5945 | recombinase family protein | |||
| 5950 | R | EcoC1cGmrSDP (100% identity) | Eco312GmrSDP | |
| 5955 | DinI-like family protein | |||