Escherichia coli RHBSTW-00482 |
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Putative Escherichia coli RHBSTW-00482 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,242,496 bp | CP056470 |
| plasmid pRHBSTW-00482_2: | 109,013 bp | CP056471 |
| plasmid pRHBSTW-00482_3: | 72,712 bp | CP056472 |
REBASE acronym: Eco0482
Org_num: 42819
All begin HV212_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13490 | type II toxin-antitoxin system RelB/DinJ family | |||
| 13495 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco0482ORF13495P |
| 13500 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.Eco0482ORF13495P |
| 13505 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | Eco0482ORF13495P |
| 13510 | 184 aa hypothetical protein | |||
| 18020 | endoribonuclease SymE | |||
| 18025 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco0482ORF18035P |
| 18030 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco0482ORF18035P |
| 18035 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco0482ORF18035P |
| 18040 | restriction endonuclease | |||
| 19840 | ash family protein | |||
| 19845 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco0482ORF19850P |
| 19850 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco0482ORF19850P |
| 19855 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco0482ORF19850P |
| 19860 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2865 | DUF262 domain-containing protein | |||
| 2870 | R | R2.EcosS3ORF2905P (100% identity) | Eco0482ORF2875P | |
| 2875 | M | M2.EcosS3ORF2905P (100% identity) | M.Eco0482ORF2875P | |
| 2880 | antitermination protein | |||
| 3735 | drug/metabolite exporter YedA | |||
| 3740 | V | V.SflC32DcmP (74% identity) | V.Eco0482DcmP | |
| 3745 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco0482DcmP |
| 3750 | phosphohydrolase | |||
| 7175 | PerC family transcriptional regulator | |||
| 7180 | M | M.EcoW082ORF7200P (100% identity) | M.Eco0482ORF7180P | |
| 7185 | DUF1382 family protein | |||
| 11405 | DNA-binding transcriptional regulator Fis | |||
| 11410 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0482ORF11410P |
| 11415 | DUF2556 family protein | |||
| 12005 | ribulose-phosphate 3-epimerase | |||
| 12010 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0482DamP |
| 12015 | cell division protein DamX | |||
| 16665 | conjugal transfer protein TraG N-terminal | |||
| 16670 | M | M.EcosS3ORF15775P (100% identity) | M.Eco0482ORF16670P | |
| 16675 | R | EcosS3ORF15775P (100% identity) | Eco0482ORF16670P | |
| 16680 | 555 aa hypothetical protein | |||
| 23315 | 71 aa hypothetical protein | |||
| 23320 | M | M.KpnYN1ORFGP (89% identity) | M.Eco0482ORF23320P | |
| 23325 | helix-turn-helix transcriptional regulator | |||
| 25565 | TrmB family transcriptional regulator | |||
| 25570 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco0482ORF25570P |
| 25585 | DUF3927 family protein | |||
| plasmid pRHBSTW-00482_2 | ||||
| 26165 | 73 aa hypothetical protein | |||
| 26170 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco0482ORF26170P | |
| 26175 | 102 aa hypothetical protein | |||
| plasmid pRHBSTW-00482_3 | ||||
| 26380 | 103 aa hypothetical protein | |||
| 26385 | M | M.EcoW082ORF26335P (100% identity) | M.Eco0482ORF26385P | |
| 26390 | 73 aa hypothetical protein | |||