Escherichia marmotae RHBSTW-00605 |
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Putative Escherichia marmotae RHBSTW-00605 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,866,904 bp | CP056697 |
| plasmid pRHBSTW-00605_2: | 127,911 bp | CP056698 |
| plasmid pRHBSTW-00605_3: | 94,137 bp | CP056699 |
REBASE acronym: Ema605
Org_num: 42824
All begin HV246_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2420 | endoribonuclease SymE | |||
| 2425 | S | S.EmaW492ORF3485P (100% identity) | S.Ema605ORF2430P | |
| 2430 | M | M.EmaW492ORF3485P (100% identity) | M.Ema605ORF2430P | |
| 2435 | R | EmaW492ORF3485P (100% identity) | Ema605ORF2430P | |
| 2440 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4125 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 4130 | R | EmaW492ORF5220P (100% identity) | Ema605ORF4135P | |
| 4135 | M | M.EmaW492ORF5220P (98% identity) | M.Ema605ORF4135P | |
| 4140 | flagellar basal body P-ring formation protein | |||
| 7180 | TraR/DksA family transcriptional regulator | |||
| 7185 | M | M.Eco3638ORF20145P (99% identity) | GATC | M.Ema605ORF7185P |
| 7190 | replication endonuclease | |||
| 12640 | drug/metabolite exporter YedA | |||
| 12645 | V | V.EmaW492DcmP (100% identity) | V.Ema605DcmP | |
| 12650 | M | M.EmaW492DcmP (100% identity) | CCWGG | M.Ema605DcmP |
| 12655 | phosphohydrolase | |||
| 15330 | PerC family transcriptional regulator | |||
| 15335 | M | M.SspPIBORF6330P (99% identity) | M.Ema605ORF15335P | |
| 15340 | DUF1382 family protein | |||
| 19770 | DNA-binding transcriptional regulator Fis | |||
| 19775 | M | M.Esp9308ORFJP (100% identity) | M.Ema605ORF19775P | |
| 19780 | DUF2556 family protein | |||
| 20300 | ribulose-phosphate 3-epimerase | |||
| 20305 | M | M.Esp9308DamP (100% identity) | GATC | M.Ema605DamP |
| 20310 | cell division protein DamX | |||
| plasmid pRHBSTW-00605_2 | ||||
| 23860 | 73 aa hypothetical protein | |||
| ??? | M | M.Ecocq9ORF29710P (98% identity) | M.Ema605ORF23865P | |
| 23870 | 103 aa hypothetical protein | |||
| plasmid pRHBSTW-00605_3 | ||||
| 24550 | recombination-associated protein RdgC | |||
| 24555 | M | M.EcoPSS10ORF47120P (77% identity) | M.Ema605ORF24555P | |
| 24560 | 95 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2405 | DUF1127 domain-containing protein | |||
| 2410 | R | EmaW492GmrSP (100% identity) | Ema605GmrSP | |
| 2415 | R | EmaW492GmrDP (100% identity) | Ema605GmrDP | |
| 2420 | endoribonuclease SymE | |||
| 2435 | type I restriction-modification system | |||
| 2440 | R | EmaW492MrrP (100% identity) | Ema605MrrP | |
| 2445 | GTPase | |||