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Putative Escherichia coli RHBSTW-00204 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,759,142 bp | CP056655 |
plasmid pRHBSTW-00204_2: | 116,506 bp | CP056656 |
plasmid pRHBSTW-00204_4: | 4,315 bp | CP056658 |
REBASE acronym: Eco0204
Org_num: 42804
All begin HV121_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9500 | 388 aa hypothetical protein | |||
9505 | M | M.EcoYPE12ORF11395P (100% identity) | M.Eco0204ORF9505P | |
9510 | S | S.EcoLR50ORF17790P (99% identity) | S.Eco0204ORF9505P | |
9515 | YecA family protein | |||
9520 | cold shock domain-containing protein | |||
9525 | R | EcoLR50ORF17790P (100% identity) | Eco0204ORF9505P | |
9530 | M48 family metallopeptidase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1705 | cell division protein DamX | |||
1710 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0204DamP |
1715 | ribulose-phosphate 3-epimerase | |||
2315 | DUF2556 family protein | |||
??? | M | M.EcoW102ORF2375P (99% identity) | ATGCAT | M.Eco0204ORF2320P |
2325 | DNA-binding transcriptional regulator Fis | |||
9145 | phosphohydrolase | |||
9150 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0204DcmP |
9155 | V | V.SsoST152DcmP (100% identity) | V.Eco0204DcmP | |
9160 | drug/metabolite exporter YedA | |||
13360 | DUF1317 family protein | |||
??? | M | M.EcoK001ORF12180P (97% identity) | M.Eco0204ORF13365P | |
13370 | DUF4060 family protein | |||
plasmid pRHBSTW-00204_2 | ||||
23505 | 73 aa hypothetical protein | |||
23510 | M | M.SmaBWH35ORF25885P (100% identity) | M.Eco0204ORF23510P | |
23515 | 89 aa hypothetical protein | |||
plasmid pRHBSTW-00204_4 | ||||
23620 | 97 aa hypothetical protein | |||
23625 | R | SenSL26ORF25460P (100% identity) | AAGCTT | Eco0204ORF23610P |
23610 | M | M.SenSL26ORF25460P (100% identity) | AAGCTT | M.Eco0204ORF23610P |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9000 | shufflon system plasmid conjugative transfer | |||
9005 | R | Kmi909ORF10115P (100% identity) | CCGAG | Eco0204ORF9010P |
9010 | M | M.SenUJ816AORFEP (100% identity) | CCGAG | M.Eco0204ORF9010P |
9015 | SpnT protein |