Escherichia coli RHBSTW-00304 |
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Putative Escherichia coli RHBSTW-00304 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,945,124 bp | CP056625 |
| plasmid pRHBSTW-00304_2: | 153,071 bp | CP056626 |
REBASE acronym: Eco0304
Org_num: 42806
All begin HV149_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10120 | 388 aa hypothetical protein | |||
| 10125 | M | M.EcoCT02ORF9475P (100% identity) | M.Eco0304ORF10125P | |
| 10130 | S | S.EcoCT02ORF9475P (100% identity) | S.Eco0304ORF10125P | |
| 10135 | YecA family protein | |||
| 10140 | R | EcoCT02ORF9475P (100% identity) | Eco0304ORF10125P | |
| 10145 | M48 family metallopeptidase | |||
| 21750 | 106 aa hypothetical protein | |||
| 21755 | M | M.EclXA1ORFHP (100% identity) | M.Eco0304ORF21755P | |
| 21760 | S | S.Eho4453ORF2025P (100% identity) | S.Eco0304ORF21755P | |
| 21765 | R | EclXA1ORFHP (99% identity) | Eco0304ORF21755P | |
| 21770 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1885 | cell division protein DamX | |||
| 1890 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0304DamP |
| 1895 | ribulose-phosphate 3-epimerase | |||
| 2510 | DUF2556 family protein | |||
| 2515 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.Eco0304ORF2515P |
| 2520 | DNA-binding transcriptional regulator Fis | |||
| 9780 | phosphohydrolase | |||
| 9785 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco0304DcmP |
| 9790 | V | V.SsoSE61DcmP (100% identity) | V.Eco0304DcmP | |
| 9795 | drug/metabolite exporter YedA | |||
| 20925 | SIR2 family protein | |||
| 20930 | R | EluCEB04ORF18755P (100% identity) | YGGCCR | Eco0304ORF20935P |
| 20935 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.Eco0304ORF20935P |
| 20940 | integrase arm-type DNA-binding domain-containing | |||
| 22130 | dGTPase | |||
| 22135 | M | M.Kgr634ORF26125P (100% identity) | M.Eco0304ORF22135P | |
| 22140 | 8-oxoguanine DNA glycosylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9530 | SpnT protein | |||
| 9535 | M | M.Cfr354ORF32890P (98% identity) | M.Eco0304ORF9535P | |
| 9540 | R | Csp16965ORF9470P (98% identity) | Eco0304ORF9535P | |
| 9545 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHBSTW-00304_2 | ||||
| 24650 | IS3-like element ISKpn38 family transposase | |||
| 24655 | R | KpnM9111McrBP (100% identity) | Eco0304McrBP | |
| 24660 | R | PgeFB2McrC2P (100% identity) | Eco0304McrCP | |
| 24665 | IS110 family transposase | |||