Escherichia coli RHBSTW-00503 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHBSTW-00503 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,895,183 bp | CP056446 |
| plasmid pRHBSTW-00503_2: | 93,941 bp | CP056447 |
| plasmid pRHBSTW-00503_5: | 4,197 bp | CP056450 |
REBASE acronym: Eco0503
Org_num: 42820
All begin HV222_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16730 | endoribonuclease SymE | |||
| 16735 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco0503ORF16745P |
| 16740 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco0503ORF16745P |
| 16745 | M | M.Esp9308ORFIP (100% identity) | CGTANNNNNGTC | M.Eco0503ORF16745P |
| 16750 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3580 | drug/metabolite exporter YedA | |||
| 3585 | V | V.EcosEC7DcmP (100% identity) | V.Eco0503DcmP | |
| 3590 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco0503DcmP |
| 3595 | phosphohydrolase | |||
| 6975 | 121 aa hypothetical protein | |||
| 6980 | R | Sso8033ORF3755P (100% identity) | Eco0503ORF6985P | |
| 6985 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco0503ORF6985P | |
| 6990 | 257 aa hypothetical protein | |||
| 7180 | LexA family transcriptional regulator | |||
| 7185 | M | M.EcoS30ORF19345P (100% identity) | GATC | M.Eco0503ORF7185P |
| 7190 | PerC family transcriptional regulator | |||
| 8895 | integrase arm-type DNA-binding domain-containing | |||
| 8900 | M | M.EcoR37ORF3180P (100% identity) | M.Eco0503ORF8900P | |
| 8905 | R | EcoDLI5aORF8980P (100% identity) | Eco0503ORF8900P | |
| 8910 | DUF3696 domain-containing protein | |||
| 10670 | DNA-binding transcriptional regulator Fis | |||
| 10675 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco0503ORF10675P |
| 10680 | DUF2556 family protein | |||
| 11310 | ribulose-phosphate 3-epimerase | |||
| 11315 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0503DamP |
| 11320 | cell division protein DamX | |||
| 16540 | 332 aa hypothetical protein | |||
| 16545 | R | EcoR55ORF14895P (100% identity) | Eco0503ORF16545P | |
| 16550 | HNH endonuclease | |||
| 22895 | TrmB family transcriptional regulator | |||
| 22900 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco0503ORF22900P |
| 22920 | DUF1737 domain-containing protein | |||
| 23750 | TrmB family transcriptional regulator | |||
| 23755 | M | M.SsoCS14ORF10750P (99% identity) | A | M.Eco0503ORF23755P |
| 23775 | anti-adapter protein IraM | |||
| plasmid pRHBSTW-00503_2 | ||||
| 24320 | tellurite/colicin resistance protein | |||
| 24335 | M | M.Kpn277ORF25805P (100% identity) | M.Eco0503ORF24335P | |
| 24340 | recombination-associated protein RdgC | |||
| plasmid pRHBSTW-00503_5 | ||||
| 24740 | Rop family plasmid primer RNA-binding protein | |||
| 24745 | R | SsoII (99% identity) | CCNGG | Eco0503ORF24735P |
| 24735 | M | M.SsoII (100% identity) | CCNGG | M.Eco0503ORF24735P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16720 | DUF1127 domain-containing protein | |||
| 16725 | R | EcoDLI5aGmrSDP (99% identity) | Eco0503GmrDP | |
| 16730 | endoribonuclease SymE | |||