Citrobacter species RHBSTW-00570 |
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Putative Citrobacter species RHBSTW-00570 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,103,116 bp | CP056399 |
| plasmid pRHBSTW-00570_2: | 179,403 bp | CP056400 |
| plasmid pRHBSTW-00570_3: | 119,726 bp | CP056401 |
REBASE acronym: Csp570
Org_num: 42788
All begin HV237_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10045 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 10065 | M | M.Csp535ORFHP (100% identity) | M.Csp570ORF10065P | |
| 10070 | S | S.Csp127ORF14035P (100% identity) | S.Csp570ORF10065P | |
| 10075 | R | Csp127ORF14035P (99% identity) | Csp570ORF10065P | |
| 10080 | M48 family metallopeptidase | |||
| 12505 | iron-containing alcohol dehydrogenase | |||
| 12510 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.Csp570ORF12510P |
| 12515 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Csp570ORF12510P |
| 12520 | YecA family protein | |||
| 12525 | R | SenSMo01ORF8345P (99% identity) | TCAGNNNNNNTGC | Csp570ORF12510P |
| 12530 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1600 | cell division protein DamX | |||
| 1605 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp570DamP |
| 1610 | ribulose-phosphate 3-epimerase | |||
| 2155 | DUF2556 family protein | |||
| 2160 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp570ORF2160P |
| 2165 | DNA-binding transcriptional regulator Fis | |||
| 9620 | 85 aa hypothetical protein | |||
| 9625 | M | M.Cfr214ORF15860P (95% identity) | M.Csp570ORF9625P | |
| 9630 | DinI-like family protein | |||
| 9830 | phosphohydrolase | |||
| 9835 | M | M.Csp986ORF9610P (99% identity) | CCWGG | M.Csp570ORF9835P |
| 9840 | V | V.Csp1044ORF9190P (100% identity) | V.Csp570ORF9835P | |
| 9845 | drug/metabolite exporter YedA | |||
| 20785 | 149 aa hypothetical protein | |||
| 20790 | R | Csp535ORFEP (76% identity) | Csp570ORF20790P | |
| 20795 | IS66 family insertion sequence hypothetical | |||
| 20930 | RNA-directed DNA polymerase | |||
| 20935 | R | KoxST34ORF24615P (99% identity) | YGGCCR | Csp570ORF20940P |
| 20940 | M | M.CfrMH19ORF24445P (99% identity) | YGGCCR | M.Csp570ORF20940P |
| 20945 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pRHBSTW-00570_2 | ||||
| 24810 | AAA family ATPase | |||
| 24815 | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Csp570ORF24815P |
| 24820 | R | Csp535ORFJP (100% identity) | CCWGG | Csp570ORF24815P |
| 24825 | tyrosine-type recombinase/integrase | |||
| 24845 | SOS response-associated peptidase family | |||
| 24850 | M | M.Kpni11ayORF5166P (100% identity) | M.Csp570ORF24850P | |
| 24855 | 73 aa hypothetical protein | |||
| plasmid pRHBSTW-00570_3 | ||||
| 25710 | 76 aa hypothetical protein | |||
| 25715 | M | M.SphSSU5ORF88P (96% identity) | M.Csp570ORF25715P | |
| 25720 | 280 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3350 | DUF262 domain-containing protein | |||
| 3355 | R | Yen3502ORF950P (99% identity) | GGCAGG | Csp570ORF3360P |
| 3360 | M | M.YroYRAII (100% identity) | GGCAGG | M.Csp570ORF3360P |
| 3365 | ATP-binding domain-containing protein | |||