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Putative Citrobacter species RHBSTW-00678 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,178,534 bp | CP056350 |
plasmid pRHBSTW-00678_2: | 304,626 bp | CP056351 |
REBASE acronym: Csp678
Org_num: 42674
All begin HV265_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13145 | M48 family metallopeptidase | |||
13150 | R | CfrNIH3IIIP (100% identity) | Csp678ORF13180P | |
13155 | cold shock domain-containing protein | |||
13160 | YecA family protein | |||
13165 | S | S.Kqu7BL08ORF11820P (14% identity) | S1.Csp678ORF13180P | |
13170 | IS5-like element IS5 family transposase | |||
13175 | S | S.Csp053ORF10830P (100% identity) | S2.Csp678ORF13180P | |
13180 | M | M.Csp053ORF10830P (100% identity) | M.Csp678ORF13180P | |
13185 | 391 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1725 | cell division protein DamX | |||
1730 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp678DamP |
1735 | ribulose-phosphate 3-epimerase | |||
2285 | DUF2556 family protein | |||
2290 | M | M.Csp976ORF2290P (100% identity) | ATGCAT | M.Csp678ORF2290P |
2295 | tyrosine-type recombinase/integrase | |||
12005 | 921 aa hypothetical protein | |||
12010 | M | M.PdiESL4ORF7880P (100% identity) | M.Csp678ORF12010P | |
12015 | alpha/beta hydrolase | |||
12945 | 153 aa hypothetical protein | |||
12950 | M | M.Rel01CORF19105P (78% identity) | M.Csp678ORF12950P | |
12955 | 166 aa hypothetical protein | |||
13470 | drug/metabolite exporter YedA | |||
13475 | V | V.Eco9067ORF2227P (100% identity) | V.Csp678ORF13480P | |
13480 | M | M.CspTSA1ORF9545P (100% identity) | CCWGG | M.Csp678ORF13480P |
13485 | phosphohydrolase | |||
15880 | 3-5 exoribonuclease | |||
15885 | M | M.Lam1445ORF18780P (92% identity) | M1.Csp678ORF15885P | |
15890 | HNH endonuclease | |||
15895 | TraR/DksA C4-type zinc finger protein | |||
15900 | M | M.CpoC01ORF18790P (92% identity) | M2.Csp678ORF15885P | |
15905 | DUF4222 domain-containing protein | |||
17130 | antitermination protein | |||
17135 | M | M.Csp053ORF8255P (100% identity) | M.Csp678ORF17135P | |
17140 | recombination protein NinG | |||
22015 | 149 aa hypothetical protein | |||
22020 | R | Csp976ORF21300P (100% identity) | Csp678ORF22020P | |
22025 | toprim domain-containing protein | |||
23030 | 301 aa hypothetical protein | |||
23035 | R | Csp976ORF22390P (100% identity) | Csp678ORF23040P | |
??? | M | M.Csp976ORF22390P (100% identity) | M.Csp678ORF23040P | |
23045 | 86 aa hypothetical protein | |||
plasmid pRHBSTW-00678_2 | ||||
25455 | 76 aa hypothetical protein | |||
25460 | M | M.Sen3039ORF24445P (100% identity) | M.Csp678ORF25460P | |
25465 | DNA polymerase III subunit beta | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3740 | DUF262 domain-containing protein | |||
3745 | R | Yen3502ORF950P (100% identity) | Csp678ORF3750P | |
3750 | M | M.Yen3502ORF950P (100% identity) | M.Csp678ORF3750P | |
3755 | DUF2130 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21825 | BrnT family toxin | |||
21830 | R | CspC21MrrP (100% identity) | Csp678MrrP | |
21835 | 46 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3360 | 65 aa hypothetical protein | |||
3365 | M | M.StySopEDamP (12% identity) | M.Csp678ORF3365AP | |
3370 | IS5 family transposase | |||
3375 | M | M.Csp137ORF3375P (100% identity) | M.Csp678ORF3365BP | |
3380 | replication endonuclease |