Citrobacter species RHBSTW-00859 |
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Putative Citrobacter species RHBSTW-00859 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,163,773 bp | CP056284 |
| plasmid pRHBSTW-00859_2: | 284,741 bp | CP056285 |
REBASE acronym: Csp859
Org_num: 42677
All begin HV302_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5395 | IS1 family transposase | |||
| 5400 | R | EcoCP83ORF15500P (100% identity) | Csp859ORF5410P | |
| 5405 | S | S.Csp821ORF5430P (100% identity) | S.Csp859ORF5410P | |
| 5410 | M | M.Csp821ORF5430P (100% identity) | M.Csp859ORF5410P | |
| 5415 | transposase | |||
| 21240 | 222 aa hypothetical protein | |||
| 21245 | R | Csp821ORF21325BP (100% identity) | Csp859ORF21265AP | |
| 21250 | IS630-like element ISEc33 family transposase | |||
| 21255 | R | Csp821ORF21325AP (100% identity) | Csp859ORF21265BP | |
| 21260 | S | S.Csp821ORF21325P (100% identity) | S.Csp859ORF21265P | |
| 21265 | M | M2.Csp821ORF21325P (100% identity) | M2.Csp859ORF21265P | |
| 21270 | M | M1.Csp821ORF21325P (100% identity) | M1.Csp859ORF21265P | |
| 21275 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp859DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.Csp821ORF2320P (100% identity) | ATGCAT | M.Csp859ORF2305P |
| 2310 | site-specific integrase | |||
| 7395 | DUF4222 domain-containing protein | |||
| 7400 | M | M.Csp821ORF7440P (100% identity) | M.Csp859ORF7400P | |
| 7405 | TraR/DksA family transcriptional regulator | |||
| 9720 | phosphohydrolase | |||
| 9725 | M | M.Csp821ORF9775P (100% identity) | CCWGG | M.Csp859ORF9725P |
| 9730 | V | V.Csp821ORF9775P (100% identity) | V.Csp859ORF9725P | |
| 9735 | drug/metabolite exporter YedA | |||
| 14690 | 59 aa hypothetical protein | |||
| 14695 | M | M.Csp821ORF14760P (100% identity) | M.Csp859ORF14695P | |
| 14700 | 85 aa hypothetical protein | |||
| 19435 | DUF1317 family protein | |||
| ??? | M | M.Csp821ORF19500P (100% identity) | M.Csp859ORF19440P | |
| 19445 | DUF4060 family protein | |||
| 22310 | 190 aa hypothetical protein | |||
| 22315 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp859ORF22320P |
| 22320 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp859ORF22320P |
| 22325 | acetyltransferase | |||
| 23295 | phage holin family protein | |||
| 23300 | M | M.Csp821ORF23360P (100% identity) | M.Csp859ORF23300P | |
| 23305 | 71 aa hypothetical protein | |||
| 23340 | RusA family crossover junction | |||
| 23345 | M | M1.Csp821ORF23405P (100% identity) | M1.Csp859ORF23345P | |
| 23350 | M | M2.Csp821ORF23405P (100% identity) | M2.Csp859ORF23345P | |
| 23355 | conserved phage C-terminal domain-containing | |||
| 24530 | 197 aa hypothetical protein | |||
| 24535 | M | M.Csp821ORF24600P (100% identity) | M.Csp859ORF24535P | |
| 24540 | replication endonuclease | |||
| 24540 | replication endonuclease | |||
| 24545 | M | M1.Csp821ORF24610P (100% identity) | M1.Csp859ORF24545P | |
| 24550 | 65 aa hypothetical protein | |||
| 24555 | M | M2.Csp821ORF24610P (100% identity) | M2.Csp859ORF24545P | |
| 24560 | 3-5 exonuclease | |||
| plasmid pRHBSTW-00859_2 | ||||
| 26455 | DNA polymerase III subunit beta | |||
| 26460 | M | M.Sen3039ORF24445P (100% identity) | M.Csp859ORF26460P | |
| 26465 | 76 aa hypothetical protein | |||