![]() |
|
![]() |
Putative Escherichia coli RHBSTW-00860 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,267,817 bp | CP056282 |
plasmid pRHBSTW-00860_2: | 97,488 bp | CP056283 |
REBASE acronym: Eco860
Org_num: 42693
All begin HV303_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18060 | endoribonuclease SymE | |||
18065 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco860ORF18075P |
18070 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco860ORF18075P |
18075 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco860ORF18075P |
18080 | restriction endonuclease | |||
19880 | ash family protein | |||
19885 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco860ORF19890P |
19890 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco860ORF19890P |
19895 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco860ORF19890P |
19900 | type IV toxin-antitoxin system AbiEi family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3740 | drug/metabolite exporter YedA | |||
3745 | V | V.SflC32DcmP (74% identity) | V.Eco860DcmP | |
3750 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco860DcmP |
3755 | phosphohydrolase | |||
7130 | PerC family transcriptional regulator | |||
7135 | M | M.EcoST131bORFEP (100% identity) | M.Eco860ORF7135P | |
7140 | serine/threonine protein phosphatase | |||
11435 | DNA-binding transcriptional regulator Fis | |||
11440 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco860ORF11440P |
11445 | DUF2556 family protein | |||
12035 | ribulose-phosphate 3-epimerase | |||
12040 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco860DamP |
12045 | cell division protein DamX | |||
16430 | conjugal transfer protein TraG N-terminal | |||
16435 | M | M.EcosS3ORF15775P (100% identity) | M.Eco860ORF16435P | |
16440 | R | EcosS3ORF15775P (100% identity) | Eco860ORF16435P | |
16445 | 555 aa hypothetical protein | |||
17725 | helix-turn-helix domain-containing protein | |||
17730 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco860ORF17730P |
17735 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco860ORF17730P |
17740 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco860ORF17730P |
17745 | McrC family protein | |||
23355 | 71 aa hypothetical protein | |||
23360 | M | M.KpnYN1ORFGP (89% identity) | M.Eco860ORF23360P | |
23365 | helix-turn-helix transcriptional regulator | |||
25630 | TrmB family transcriptional regulator | |||
25635 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco860ORF25635P |
25650 | DUF3927 family protein | |||
plasmid pRHBSTW-00860_2 | ||||
25955 | 102 aa hypothetical protein | |||
25960 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco860ORF25960P |
25965 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17740 | Alw26I/Eco31I/Esp3I family type II restriction | |||
17745 | R | EcosS9McrCP (100% identity) | Eco860McrCP | |
17750 | R | EcosS3McrBP (100% identity) | Eco860McrBP | |
17755 | glycosyltransferase family 2 protein |