Burkholderia cenocepacia K56-2 |
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Putative Burkholderia cenocepacia K56-2 RM systems
Ref: Garcia-Romero,I. and Valvano,M.A. unpublished
REBASE ref # 31016
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,673,077 bp | CP053300 |
| chromosome 2: | 3,211,025 bp | CP053301 |
| plasmid pBCK56: | 92,661 bp | CP053303 |
REBASE acronym: BceK562
Org_num: 43250
All begin K562_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10442 | 456 aa hypothetical protein | |||
| 10443 | M | M.BceK56ORF8P (100% identity) | M.BceK562ORF10443P | |
| 10444 | transposase-related protein | |||
| 10445 | insertion element protein | |||
| 10446 | R | BceK56ORF2719P (96% identity) | BceK562ORF10443P | |
| 10447 | DNA gyrase subunit B | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10189 | 108 aa hypothetical protein | |||
| ??? | M | M.BceK56ORFAP (100% identity) | M.BceK562ORFAP | |
| 10190 | 848 aa hypothetical protein | |||
| chromosome 2 | ||||
| 21004 | tryptophan synthase subunit beta | |||
| 21005 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.BceK562ORF21005P |
| 21006 | tryptophan synthase subunit alpha | |||
| 21053 | 303 aa hypothetical protein | |||
| 21054 | M | M.BceK56ORF51P (100% identity) | GGCC | M.BceK562ORF21054P |
| 21055 | 227 aa hypothetical protein | |||
| plasmid pBCK56 | ||||
| 40082 | 168 aa hypothetical protein | |||
| ??? | M | M.BceK56ORF119P (100% identity) | M.BceK562ORF40083P | |
| 40084 | 153 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13425 | 127 aa hypothetical protein | |||
| 13426 | R | BspEMB26ORF190P (100% identity) | CACAG | BceK562ORF13427P |
| 13427 | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.BceK562ORF13427P |
| 13428 | outer membrane porin lipoprotein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 21541 | UDP-N-acetylglucosamine | |||
| 21542 | R | BceK56McrAP (84% identity) | BceK562ORF21542P | |
| 21543 | shikimate transporter | |||