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Putative Citrobacter species RHBSTW-00887 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,327,400 bp | CP056267 |
plasmid pRHBSTW-00887_2: | 298,088 bp | CP056268 |
REBASE acronym: Csp0887
Org_num: 42664
All begin HV314_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4285 | 53 aa hypothetical protein | |||
4290 | S | S.Kmi166ORF21725P (100% identity) | S.Csp0887ORF4305P | |
4295 | AAA family ATPase | |||
4300 | 264 aa hypothetical protein | |||
4305 | M | M.Kmi166ORF21725P (100% identity) | M.Csp0887ORF4305P | |
4310 | 295 aa hypothetical protein | |||
10830 | 388 aa hypothetical protein | |||
10835 | M | M.CyoCF10ORF9780P (100% identity) | M.Csp0887ORF10835P | |
10840 | S | S.CyoCF10ORF9780P (100% identity) | S.Csp0887ORF10835P | |
10845 | YecA family protein | |||
10850 | R | Cbr1b1ORF16305P (99% identity) | Csp0887ORF10835P | |
10855 | M48 family metallopeptidase | |||
21830 | IS110-like element IS4321 family transposase | |||
21835 | R | Cbr1b1ORF3220P (100% identity) | Csp0887ORF21840P | |
21840 | M | M.Cbr1b1ORF3220P (100% identity) | M.Csp0887ORF21840P | |
21845 | S | S2.Cbr1b1ORF3220P (71% identity) | S.Csp0887ORF21840P | |
21850 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
430 | DUF262 domain-containing protein | |||
435 | RM | Cpo85039ORF1065P (100% identity) | Csp0887ORF435P | |
440 | 133 aa hypothetical protein | |||
445 | Reverse transcriptase | |||
450 | RM | Cpo85039ORF1080P (100% identity) | Csp0887ORF450P | |
455 | BREX-1 system phosphatase PglZ type A | |||
1735 | cell division protein DamX | |||
1740 | M | M.Eco9067DamP (100% identity) | GATC | M.Csp0887DamP |
1745 | ribulose-phosphate 3-epimerase | |||
2280 | DUF2556 family protein | |||
2285 | M | M.Csp976ORF2290P (99% identity) | ATGCAT | M.Csp0887ORF2285P |
2290 | tyrosine-type recombinase/integrase | |||
4505 | acetyltransferase | |||
4510 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Csp0887ORF4510P |
4515 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Csp0887ORF4510P |
4520 | 190 aa hypothetical protein | |||
7310 | chromosome partitioning protein ParB | |||
7315 | M | M.Cbr1b1ORF12765P (99% identity) | M.Csp0887ORF7315P | |
7320 | DUF1317 family protein | |||
10540 | phosphohydrolase | |||
10545 | M | M.Cbr1b1ORF16005P (100% identity) | CCWGG | M.Csp0887ORF10545P |
10550 | V | V.Eco9067ORF2227P (100% identity) | V.Csp0887ORF10545P | |
10555 | drug/metabolite exporter YedA | |||
21810 | HNH endonuclease | |||
21815 | R | Cbr1b1ORF2005P (99% identity) | Csp0887ORF21815P | |
21820 | HNH endonuclease | |||
plasmid pRHBSTW-00887_2 | ||||
25735 | 76 aa hypothetical protein | |||
25740 | M | M.Sen3039ORF24445P (100% identity) | M.Csp0887ORF25740P | |
25745 | DNA polymerase III subunit beta | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pRHBSTW-00887_2 | ||||
25540 | recombinase family protein | |||
25550 | M | M.Pvu49741ORF10700P (43% identity) | M.Csp0887ORF25550P | |
25555 | LysR family transcriptional regulator | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24355 | 59 aa hypothetical protein | |||
24360 | M | M.EcoNW114ORF23005P (100% identity) | M.Csp0887ORF24360P | |
24365 | 82 aa hypothetical protein |