Streptococcus suis ISU1606 |
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Putative Streptococcus suis ISU1606 RM systems
Ref: Nicholson,T.L. et al. unpublished
REBASE ref # 30969
Complete sequence: 2,073,988 bp
GenBank #: CP030017
REBASE acronym: Ssu1606
Org_num: 17562
All begin DK235_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3470 | FAD-containing oxidoreductase | |||
| 3475 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | Ssu1606ORF3480P |
| 3480 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.Ssu1606ORF3480P |
| 3485 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu1606ORF3480P |
| 3490 | 243 aa hypothetical protein | |||
| 6925 | ribose-5-phosphate isomerase RpiA | |||
| 6930 | S | S2.SsucSS389ORF6590P (100% identity) | S2.Ssu1606ORF9175P | |
| 6935 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.Ssu1606ORF9175P |
| 6940 | M | M.SsuiS10ORFBP (100% identity) | M.Ssu1606ORF9175P | |
| 6945 | R | SsuiS10ORFBP (100% identity) | Ssu1606ORF9175P | |
| 6950 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 8540 | serine--tRNA ligase | |||
| 8545 | M | M.SsuiS10ORFAP (100% identity) | M.Ssu1606ORF3130P | |
| 8550 | S | S.SsuiS10ORFAP (100% identity) | S.Ssu1606ORF3130P | |
| 8555 | R | SsuiS10ORFAP (100% identity) | Ssu1606ORF3130P | |
| 8560 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4775 | 142 aa hypothetical protein | |||
| 4780 | M | M.SsuSs45ORF3055P (98% identity) | M.Ssu1606ORF2530P | |
| 4785 | 31 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3410 | 62 aa hypothetical protein | |||
| ??? | M | M.SsuSs45ORF2350P (100% identity) | M.Ssu1606ORF10105P | |
| 3425 | R | SsuiS10ORFEP (100% identity) | Ssu1606ORF10105P | |
| 3430 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4215 | 262 aa hypothetical protein | |||
| 4220 | R | SsuiS10McrBP (100% identity) | Ssu1606McrBP | |
| 4225 | R | SsucSS389McrCP (100% identity) | Ssu1606McrCP | |
| 4230 | site-specific integrase | |||