Escherichia coli WP4-S18-ESBL-08 |
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Putative Escherichia coli WP4-S18-ESBL-08 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
| Sequence length: | GenBank #: | |
| Chromosome: | 4,920,533 bp | AP022095 |
| plasmid pWP4-S18-ESBL-08_1: | 158,292 bp | AP022096 |
| plasmid pWP4-S18-ESBL-08_2: | 93,398 bp | AP022097 |
REBASE acronym: Eco4BL08
Org_num: 41999
All begin WP4S18E08_, WP4S18E08_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39840 | restriction endonuclease | |||
| 39850 | R | Eco8SOC08ORF11210P (100% identity) | Eco4BL08ORF39860P | |
| 39860 | M | M.EcoJX03ORF19005P (100% identity) | M.Eco4BL08ORF39860P | |
| 39870 | S | S.Eco6563ORF18095P (100% identity) | S.Eco4BL08ORF39860P | |
| 39880 | endoribonuclease SymE | |||
| 40290 | restriction methylase | |||
| ??? | M | M.Eco6563ORF17875P (100% identity) | M.Eco4BL08ORF40300P | |
| 40320 | S | S.EcoCT02ORF23540P (69% identity) | S.Eco4BL08ORF40300P | |
| 40330 | 146 aa hypothetical protein | |||
| 40340 | integrase | |||
| 40350 | transposase InsC for insertion element IS2A | |||
| 40360 | R | Eco6563ORF17875P (87% identity) | Eco4BL08ORF40300P | |
| 40370 | oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3450 | cell division protein DamX | |||
| 3460 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4BL08DamP |
| 3470 | ribulose-phosphate 3-epimerase | |||
| 4640 | 59 aa hypothetical protein | |||
| 4650 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco4BL08ORF4650P |
| 4660 | DNA-binding protein Fis | |||
| 8030 | 32 aa hypothetical protein | |||
| ??? | M | M.EcoW05E18ORF605P (100% identity) | M.Eco4BL08ORF8040P | |
| 8050 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco4BL08ORF8040P |
| 8060 | transposase InsC for insertion element IS2A | |||
| 14050 | protein ninB | |||
| 14060 | M | M.EcoF33ORF7490P (100% identity) | M.Eco4BL08ORF14060P | |
| 14070 | protein ninF | |||
| 18780 | 231 aa hypothetical protein | |||
| 18790 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco4BL08DcmP |
| 18800 | V | V.SsoSE61DcmP (100% identity) | V.Eco4BL08DcmP | |
| 18810 | inner membrane transporter YedA | |||
| 29600 | replication endonuclease from | |||
| 29610 | M | M.Eco9076ORF58P (100% identity) | M.Eco4BL08ORF29610P | |
| 29620 | 75 aa hypothetical protein | |||
| 32730 | 52 aa hypothetical protein | |||
| 32740 | M | M.EcoTL14ORF18050P (100% identity) | M.Eco4BL08ORF32740P | |
| 32750 | cell division protein ZapA | |||
| 35560 | ATPase | |||
| 35570 | M | M.SflN116ORF17750P (100% identity) | M.Eco4BL08ORF35570P | |
| 35580 | antitermination protein | |||
| 40250 | 216 aa hypothetical protein | |||
| 40260 | R | EcoPSJ29ORF37350P (100% identity) | Eco4BL08ORF40260P | |
| 40270 | mcrBC 5-methylcytosine restriction system | |||
| plasmid pWP4-S18-ESBL-08_1 | ||||
| 10450 | 145 aa hypothetical protein | |||
| 10460 | M | M.SflN92ORF24820P (100% identity) | M.Eco4BL08ORF10460P | |
| 10470 | 73 aa hypothetical protein | |||
| plasmid pWP4-S18-ESBL-08_2 | ||||
| 20450 | 208 aa hypothetical protein | |||
| 20460 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco4BL08ORF20460P |
| 20470 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39240 | 1293 aa hypothetical protein | |||
| 39250 | R | Vfl5335ORF24530P (100% identity) | CAGAAC | Eco4BL08ORF39260P |
| 39260 | M | M.Vfl5335ORF24530P (100% identity) | CAGAAC | M.Eco4BL08ORF39260P |
| 39270 | WYL domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39830 | GTP-binding protein YjiA | |||
| 39840 | R | Eco6563MrrP (100% identity) | Eco4BL08MrrP | |
| 39850 | type I restriction-modification system | |||
| 40260 | restriction endonuclease | |||
| 40270 | R | EcoPSJ29McrC2P (100% identity) | Eco4BL08McrCP | |
| 40280 | R | Eco6563McrBP (100% identity) | Eco4BL08McrBP | |
| 40290 | restriction methylase | |||