Escherichia coli WP4-S17-ESBL-08 |
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Putative Escherichia coli WP4-S17-ESBL-08 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 30911
Complete sequence: 5,067,025 bp
GenBank #: AP022049
REBASE acronym: Eco4S17
Org_num: 41997
All begin WP4S17E08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39630 | 550 aa hypothetical protein | |||
| 39640 | R | EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | Eco4S17ORF39650P |
| 39650 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco4S17ORF39650P |
| 39660 | S | S.SflN101ORF11675P (98% identity) | CCANNNNNNNNNTTGG | S.Eco4S17ORF39650P |
| 39670 | endoribonuclease SymE | |||
| 40130 | restriction methylase | |||
| 40140 | M | M.EcoZ151ORF20915P (100% identity) | CCANNNNNNNNNTTGG | M.Eco4S17ORF40140P |
| 40150 | S | S.EcoZ151ORF20915P (100% identity) | CCANNNNNNNNNTTGG | S.Eco4S17ORF40140P |
| 40160 | R | EcoZ151ORF20915P (100% identity) | CCANNNNNNNNNTTGG | Eco4S17ORF40140P |
| 40170 | alcohol dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3610 | cell division protein DamX | |||
| 3620 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4S17DamP |
| 3630 | ribulose-phosphate 3-epimerase | |||
| 4630 | 59 aa hypothetical protein | |||
| 4640 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco4S17ORF4640P |
| 4650 | DNA-binding protein Fis | |||
| 19030 | phosphohydrolase | |||
| 19040 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco4S17DcmP |
| 19050 | V | V.EcosE1DcmP (74% identity) | V.Eco4S17DcmP | |
| 19060 | inner membrane transporter YedA | |||
| 40080 | 216 aa hypothetical protein | |||
| 40090 | R | EcoZ151ORF20895P (100% identity) | Eco4S17ORF40090P | |
| 40100 | mcrBC 5-methylcytosine restriction system | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40090 | restriction endonuclease | |||
| 40100 | R | EcoZ151McrCP (100% identity) | Eco4S17McrCP | |
| 40110 | R | EcoZ151McrBP (100% identity) | Eco4S17McrBP | |
| 40120 | 60 aa hypothetical protein | |||