Ref: Greco-Stewart,V.S. et al. Vox Sang. 102 (3), 212-220 (2012)

REBASE ref # 30956

Sequence length:GenBank #:
Chromosome: 5,352,713 bp CP053927
plasmid pAM01: 139,857 bp CP053926

REBASE acronym: Sma2010

Org_num: 42088

 

All begin HP437_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
1100 restriction endonuclease subunit S
1105 M M.SmaMCBORF14490P (96% identity) M.Sma2010ORF1105P
1110 S S.Cko0ORF3720P (59% identity) S.Sma2010ORF1105P
1115 virulence RhuM family protein
1120 R Hal7135ORF19760P (98% identity) Sma2010ORF1105P
1125 M48 family metallopeptidase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
11595 82 aa hypothetical protein
11600 M M.SmaSM39ORF517P (97% identity) M.Sma2010ORF11600P
11605 ANR family transcriptional regulator
 
24905 ribulose-phosphate 3-epimerase
24910 M M.SspNIH1Dam (100% identity) GATC M.Sma2010DamP
24915 SPOR domain-containing protein
 
plasmid pAM01
 
15 108 aa hypothetical protein
20 M M.SmaE13ORF50520P (99% identity) M.Sma2010ORF20P
25 74 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1125 M48 family metallopeptidase
1130 R YpsYpse1MrrP (99% identity) Sma2010MrrP
1135 inovirus Gp2 family protein
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