Pseudomonas species ABC1 |
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Putative Pseudomonas species ABC1 RM systems
Ref: Donoso,R. et al. unpublished
REBASE ref # 30806
Complete sequence: 4,035,896 bp
GenBank #: CP058349
REBASE acronym: PspABC1
Org_num: 41644
All begin HW090_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11240 | helix-turn-helix transcriptional regulator | |||
| 11245 | R | PstG19ORF18330P (98% identity) | GCCNNNNNGTCC | PspABC1IP |
| 11250 | S | S.Bth426III (86% identity) | GCCNNNNNGTCC | S.PspABC1I |
| 11255 | DNA binding domain-containing protein | |||
| 11260 | M | M2.PspFeN3WORF12435P (92% identity) | GCCNNNNNGTCC | M2.PspABC1I |
| 11265 | M | M1.PaeBL12ORF3635P (97% identity) | GCCNNNNNGTCC | M1.PspABC1I |
| 11270 | transposase | |||
| 17605 | 694 aa hypothetical protein | |||
| 17610 | M | M.PstMN1ORF22460P (90% identity) | TTGAYNNNNGTG | M.PspABC1II |
| 17615 | S | S.Psp12ORF2751P (52% identity) | TTGAYNNNNGTG | S.PspABC1II |
| 17620 | PD-(D/E)XK nuclease family protein | |||
| 17650 | McrC family protein | |||
| 17655 | R | PspD7DORF15640P (95% identity) | PspABC1ORF17655P | |
| 17660 | 411 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2110 | DNA topoisomerase III | |||
| 2115 | M | M.PaePB354ORF13100P (95% identity) | GACNNNGTC | M.PspABC1III |
| 2120 | R | PaePB354ORF13100P (93% identity) | GACNNNGTC | PspABC1IIIP |
| 2125 | IS3 family transposase | |||
| 13305 | BREX system P-loop protein BrxC | |||
| 13310 | RM | Ppu715ORF51510P (99% identity) | PspABC1ORF13310P | |
| 13315 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17640 | DEAD/DEAH box helicase | |||
| 17645 | R | Pto110McrBP (85% identity) | PspABC1McrBP | |
| 17650 | R | Psp12McrCP (83% identity) | PspABC1McrCP | |
| 17655 | type I restriction endonuclease subunit R | |||