Pseudomonas aeruginosa SE5458 |
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Putative Pseudomonas aeruginosa SE5458 RM systems
Ref: Zhou,D. unpublished
REBASE ref # 30477
Complete sequence: 7,157,752 bp
GenBank #: CP046406
REBASE acronym: Pae5458
Org_num: 41763
All begin GNT62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10585 | helix-turn-helix transcriptional regulator | |||
| 10590 | R | PaeLo565ORF25365P (100% identity) | GATNNNNNNNRTGGC | Pae5458ORF10600P |
| 10595 | S | S.PaeNDM1ORF495P (100% identity) | GATNNNNNNNRTGGC | S.Pae5458ORF10600P |
| 10600 | M | M.PaeLo565ORF25365P (100% identity) | GATNNNNNNNRTGGC | M.Pae5458ORF10600P |
| 10605 | mCpol domain-containing protein | |||
| 19720 | IS3 family transposase | |||
| 19725 | R | PdePDENORFFP (100% identity) | CCCNNNNNGTAG | Pae5458ORF19745P |
| 19730 | S | S.PdePDENORFFP (100% identity) | CCCNNNNNGTAG | S.Pae5458ORF19745P |
| 19735 | ATP-dependent helicase | |||
| 19740 | AAA family ATPase | |||
| 19745 | M | M2.PdePDENORFFP (99% identity) | CCCNNNNNGTAG | M2.Pae5458ORF19745P |
| 19750 | M | M1.PaeWS394ORF2447P (100% identity) | CCCNNNNNGTAG | M1.Pae5458ORF19745P |
| 19755 | DNA-processing protein DprA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6730 | 99 aa hypothetical protein | |||
| 6735 | M | M.PaeLo565ORF5960P (100% identity) | M.Pae5458ORF6735P | |
| 6740 | phosphohydrolase | |||
| 6925 | 86 aa hypothetical protein | |||
| 6930 | M | M.PaeLo565ORF6155P (100% identity) | M.Pae5458ORF6930P | |
| 6935 | SOS response-associated peptidase family | |||
| 12360 | Com family DNA-binding transcriptional | |||
| 12365 | M | M.PaeXM8ORFBP (100% identity) | M.Pae5458ORF12365P | |
| 12370 | tape measure protein | |||
| 14995 | phage tail protein | |||
| ??? | M | M.Pae80432ORFGP (100% identity) | M.Pae5458ORF15005P | |
| 15010 | TonB-dependent receptor | |||
| 15340 | 147 aa hypothetical protein | |||
| 15345 | M | M2.PphYMCORF550P (100% identity) | M1.Pae5458ORF15345P | |
| 15350 | M | M1.Pae5429ORF18330P (100% identity) | M2.Pae5458ORF15345P | |
| 15355 | DUF3820 family protein | |||
| 17010 | IS3 family transposase | |||
| 17015 | V | V.PaePB367ORF15990P (100% identity) | V.Pae5458ORF17020P | |
| 17020 | M | M.PaeWS394ORF3066P (100% identity) | M.Pae5458ORF17020P | |
| 17025 | 850 aa hypothetical protein | |||
| 23970 | 160 aa hypothetical protein | |||
| 23975 | M | M.Pae5524ORF5220P (100% identity) | M.Pae5458ORF23975P | |
| 34430 | 107 aa hypothetical protein | |||
| 27985 | DsbA family protein | |||
| 27990 | M | M.PaePH21ORF25575P (100% identity) | M.Pae5458ORF27990P | |
| 27995 | ATP-binding protein | |||
| 30750 | MFS transporter | |||
| 30755 | M | M.PaeZPPH29ORF4210P (100% identity) | M.Pae5458ORF30755P | |
| 30760 | Com family DNA-binding transcriptional | |||
| 32000 | TraR/DksA family transcriptional regulator | |||
| 32005 | M | M.PaeTBCFORFBP (89% identity) | M.Pae5458ORF32005P | |
| 32010 | phosphoadenosine phosphosulfate reductase family | |||