Escherichia coli AH65 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AH65 RM systems
Ref: Yin,D. unpublished
REBASE ref # 29305
| Sequence length: | GenBank #: | |
| Chromosome: | 4,769,240 bp | CP058302 |
| plasmid pAH65-2: | 84,033 bp | CP058304 |
REBASE acronym: EcoAH65
Org_num: 41687
All begin HUU85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13930 | 165 aa hypothetical protein | |||
| 13935 | R | EcoAH62ORF19860P (100% identity) | EcoAH65ORF13950P | |
| 13940 | DUF4268 domain-containing protein | |||
| 13945 | S | S.EcoAH62ORF19860P (100% identity) | S.EcoAH65ORF13950P | |
| 13950 | M | M.EcoAH62ORF19860P (100% identity) | M.EcoAH65ORF13950P | |
| 13955 | 60 aa hypothetical protein | |||
| 14210 | endoribonuclease SymE | |||
| 14215 | S | S.EcoAH62ORF19590P (100% identity) | S.EcoAH65ORF14220P | |
| 14220 | M | M.EcoAH62ORF19590P (100% identity) | M.EcoAH65ORF14220P | |
| 14225 | R | SspS13ORF3945P (100% identity) | EcoAH65ORF14220P | |
| 14230 | 322 aa hypothetical protein | |||
| 20005 | M48 family metallopeptidase | |||
| 20010 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | EcoAH65ORF20030P |
| 20015 | macro domain-containing protein | |||
| 20020 | DUF4433 domain-containing protein | |||
| 20025 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.EcoAH65ORF20030P |
| 20030 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoAH65ORF20030P |
| 20035 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2045 | drug/metabolite exporter YedA | |||
| 2050 | V | V.EcosPA11DcmP (100% identity) | V.EcoAH65DcmP | |
| 2055 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoAH65DcmP |
| 2060 | phosphohydrolase | |||
| 8525 | DNA-binding transcriptional regulator Fis | |||
| 8530 | M | M.Ecou015ORF2460P (100% identity) | ATGCAT | M.EcoAH65ORF8530P |
| 8535 | DUF2556 family protein | |||
| 9150 | ribulose-phosphate 3-epimerase | |||
| 9155 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAH65DamP |
| 9160 | cell division protein DamX | |||
| 13920 | integrase arm-type DNA-binding domain-containing | |||
| 13925 | R | SflFF64ORF19855P (100% identity) | GAAC | EcoAH65ORF13925P |
| 13930 | 165 aa hypothetical protein | |||
| 15890 | PerC family transcriptional regulator | |||
| 15895 | M | M.EcoAH62ORF17915P (100% identity) | GATC | M.EcoAH65ORF15895P |
| 15900 | LexA family transcriptional regulator | |||
| plasmid pAH65-2 | ||||
| 23290 | 101 aa hypothetical protein | |||
| 23295 | M | M.SflFF3ORF25360P (100% identity) | M.EcoAH65ORF23295P | |
| 23300 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16005 | recombinase family protein | |||
| 16010 | R | EcoAH62GmrSDP (100% identity) | EcoAH65GmrSDP | |
| 16015 | 300 aa hypothetical protein | |||