Salmonella enterica subsp. enterica serovar Saintpaul CVM N40391 |
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Putative Salmonella enterica subsp. enterica serovar Saintpaul CVM N40391 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
| Sequence length: | GenBank #: | |
| Chromosome: | 4,843,604 bp | CP049983 |
| plasmid pN40391-1: | 114,941 bp | CP049984 |
REBASE acronym: Sen40391
Org_num: 41502
All begin A9V27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19455 | restriction endonuclease | |||
| 19460 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen40391ORF19465P |
| 19465 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen40391ORF19465P |
| 19470 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen40391ORF19465P |
| 19475 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.Sen40391DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen40391ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8755 | phosphohydrolase | |||
| 8760 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen40391DcmP |
| 8765 | V | V.StyUK1DcmP (100% identity) | V.Sen40391DcmP | |
| 8770 | drug/metabolite exporter YedA | |||
| 15070 | ead/Ea22-like family protein | |||
| 15075 | M | M.Ssp15303ORFAP (100% identity) | M.Sen40391ORF15075P | |
| 15080 | Eaa protein | |||
| 19595 | YebC/PmpR family DNA-binding transcriptional | |||
| 19600 | R | SenS25ORF20520P (100% identity) | Sen40391ORF19600P | |
| 19605 | malate transporter | |||
| 19605 | malate transporter | |||
| 19610 | M | M.SspZ69DndBP (100% identity) | M.Sen40391DndBP | |
| 19615 | DNA phosphorothioation system sulfurtransferase | |||
| 19610 | DNA sulfur modification protein DndB | |||
| 19615 | M | M.SenS25DndCP (100% identity) | M.Sen40391DndCP | |
| 19620 | DNA sulfur modification protein DndD | |||
| 19615 | DNA phosphorothioation system sulfurtransferase | |||
| 19620 | M | M.SenS25DndDP (100% identity) | M.Sen40391DndDP | |
| 19625 | DNA sulfur modification protein DndE | |||
| 19620 | DNA sulfur modification protein DndD | |||
| 19625 | M | M.SspZ69DndEP (100% identity) | M.Sen40391DndEP | |
| 19630 | DUF262 domain-containing protein | |||
| 19630 | DUF262 domain-containing protein | |||
| 19635 | R | SenS25DptHP (100% identity) | Sen40391DptHP | |
| 19640 | DNA phosphorothioation-dependent restriction | |||
| 19635 | DNA phosphorothioation-dependent restriction | |||
| 19640 | R | SspZ69DptGP (100% identity) | Sen40391DptGP | |
| 19645 | DNA phosphorothioation-dependent restriction | |||
| 19640 | DNA phosphorothioation-dependent restriction | |||
| 19645 | R | SenS25DptFP (100% identity) | Sen40391DptFP | |
| 19650 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pN40391-1 | ||||
| 23755 | 73 aa hypothetical protein | |||
| 23760 | M | M.SspPIBORF23080P (100% identity) | M.Sen40391ORF23760P | |
| 23765 | 104 aa hypothetical protein | |||
| 23915 | IS6-like element IS26 family transposase | |||
| 23920 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen40391ORF23925P |
| 23925 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Sen40391ORF23925P |
| 23930 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17240 | 33 aa hypothetical protein | |||
| 17245 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen40391ORF17250P |
| 17250 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen40391ORF17250P |
| 17255 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19450 | BrnT family toxin | |||
| 19455 | R | StyUK1MrrP (100% identity) | Sen40391MrrP | |
| 19460 | type I restriction-modification system | |||