Escherichia coli SCU-397 |
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Putative Escherichia coli SCU-397 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30384
| Sequence length: | GenBank #: | |
| Chromosome: | 5,386,154 bp | CP054828 |
| plasmid pSCU-397-1: | 144,377 bp | CP054829 |
REBASE acronym: EcoSCU397
Org_num: 40986
All begin HPE43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24690 | restriction endonuclease | |||
| 24695 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.EcoSCU397ORF24695P |
| 24700 | S | S.Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | S.EcoSCU397ORF24695P |
| 24705 | R | Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | EcoSCU397ORF24695P |
| 24710 | endoribonuclease SymE | |||
| 26135 | AAA family ATPase | |||
| ??? | S | S.EcoC311ORF21890P (97% identity) | S.EcoSCU397ORF26155P | |
| 26155 | M | M.EcosEC2ORF410P (100% identity) | M.EcoSCU397ORF26155P | |
| 26160 | R | Ecoi012ORF18325P (99% identity) | EcoSCU397ORF26155P | |
| 26165 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3130 | transposase | |||
| 3135 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoSCU397ORF3135P |
| 3140 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoSCU397ORF3135P |
| 3145 | transposase | |||
| 4830 | cell division protein DamX | |||
| 4835 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU397DamP |
| 4840 | ribulose-phosphate 3-epimerase | |||
| 5365 | DUF2556 family protein | |||
| 5370 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoSCU397ORF5370P |
| 5375 | DNA-binding transcriptional regulator Fis | |||
| 12945 | phosphohydrolase | |||
| 12950 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.EcoSCU397DcmP |
| 12955 | V | V.SflFF64DcmP (100% identity) | V.EcoSCU397DcmP | |
| 12960 | drug/metabolite exporter YedA | |||
| plasmid pSCU-397-1 | ||||
| 26695 | 103 aa hypothetical protein | |||
| 26700 | M | M.Sfl2142ORF380P (100% identity) | M.EcoSCU397ORF26700P | |
| 26705 | 73 aa hypothetical protein | |||