Escherichia coli SCU-147 |
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Putative Escherichia coli SCU-147 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
| Sequence length: | GenBank #: | |
| Chromosome: | 5,071,058 bp | CP054325 |
| plasmid pSCU-147-1: | 104,744 bp | CP054326 |
REBASE acronym: EcoSCU147
Org_num: 40278
All begin HHJ39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17695 | endoribonuclease SymE | |||
| 17700 | S | S.SflC32ORFCP (100% identity) | S.EcoSCU147ORF17705P | |
| 17705 | M | M.SspS13ORF3945P (100% identity) | M.EcoSCU147ORF17705P | |
| 17710 | R | SflC32ORFCP (100% identity) | EcoSCU147ORF17705P | |
| 17715 | 322 aa hypothetical protein | |||
| plasmid pSCU-147-1 | ||||
| 24580 | type II toxin-antitoxin system Phd/YefM family | |||
| 24585 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoSCU147ORF24585P |
| 24590 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoSCU147ORF24585P |
| 24595 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoSCU147ORF24585P |
| 24600 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 605 | TrmB family transcriptional regulator | |||
| 610 | M | M.SflC32ORFBP (100% identity) | M.EcoSCU147ORF610P | |
| 630 | tellurite resistance protein | |||
| 3890 | drug/metabolite exporter YedA | |||
| 3895 | V | V.SflC32DcmP (74% identity) | V.EcoSCU147DcmP | |
| 3900 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU147DcmP |
| 3905 | phosphohydrolase | |||
| 11255 | DNA-binding transcriptional regulator Fis | |||
| 11260 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoSCU147ORF11260P |
| 11265 | DUF2556 family protein | |||
| 11855 | ribulose-phosphate 3-epimerase | |||
| 11860 | M | M.EcoSCU120DamP (99% identity) | GATC | M.EcoSCU147DamP |
| 11865 | cell division protein DamX | |||
| 14760 | DUF3850 domain-containing protein | |||
| 14765 | M | M.SflFF35ORF20P (100% identity) | M.EcoSCU147ORF14765P | |
| 14770 | 330 aa hypothetical protein | |||
| plasmid pSCU-147-1 | ||||
| 24650 | 102 aa hypothetical protein | |||
| 24655 | M | M.UbapRSB107ORFAP (99% identity) | M.EcoSCU147ORF24655P | |
| 24660 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4375 | shufflon system plasmid conjugative transfer | |||
| 4380 | R | EcoO81ORFBP (99% identity) | CCGAG | EcoSCU147ORF4385P |
| 4385 | M | M.EcoO81ORFBP (100% identity) | CCGAG | M.EcoSCU147ORF4385P |
| 4390 | SpnT protein | |||