Escherichia coli SCU-175 |
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Putative Escherichia coli SCU-175 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30384
| Sequence length: | GenBank #: | |
| Chromosome: | 5,385,194 bp | CP054379 |
| plasmid pSCU-175-1: | 124,349 bp | CP054380 |
| plasmid pSCU-175-2: | 71,738 bp | CP054381 |
REBASE acronym: EcoSCU175
Org_num: 40281
All begin HPE51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22285 | DUF262 domain-containing protein | |||
| 22290 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | EcoSCU175ORF22295P |
| 22295 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.EcoSCU175ORF22295P |
| 22300 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.EcoSCU175ORF22295P |
| 22305 | endoribonuclease SymE | |||
| 22495 | 128 aa hypothetical protein | |||
| 22500 | M | M.EcoSP5ORF1945P (100% identity) | M.EcoSCU175ORF22500P | |
| 22505 | S | S.EcoSP5ORF1945P (100% identity) | S.EcoSCU175ORF22500P | |
| 22510 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2120 | cell division protein DamX | |||
| 2125 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU175DamP |
| 2130 | ribulose-phosphate 3-epimerase | |||
| 2650 | DUF2556 family protein | |||
| 2655 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoSCU175ORF2655P |
| 2660 | DNA-binding transcriptional regulator Fis | |||
| 6300 | 257 aa hypothetical protein | |||
| 6305 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoSCU175ORF6305P | |
| 6310 | R | Sso8033ORF3755P (100% identity) | EcoSCU175ORF6305P | |
| 6315 | 121 aa hypothetical protein | |||
| 9555 | TrmB family transcriptional regulator | |||
| 9560 | M | M.EcoS0786ORF24765P (99% identity) | A | M.EcoSCU175ORF11465P |
| 9580 | anti-adapter protein IraM | |||
| 15170 | RusA family crossover junction | |||
| 15175 | M | M.EcoSCU482ORF21135P (100% identity) | GATC | M.EcoSCU175ORF15175P |
| 15180 | PerC family transcriptional regulator | |||
| 15940 | drug/metabolite exporter YedA | |||
| 15945 | V | V.SflC32DcmP (74% identity) | V.EcoSCU175DcmP | |
| 15950 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.EcoSCU175DcmP |
| 15955 | phosphohydrolase | |||
| 19295 | 64 aa hypothetical protein | |||
| 19300 | M | M.EcosE1ORFAP (96% identity) | M.EcoSCU175ORF19300P | |
| 19305 | TrmB family transcriptional regulator | |||
| 22475 | HNH endonuclease | |||
| 22480 | R | EcosB2CORFAP (100% identity) | EcoSCU175ORF22480P | |
| 22485 | AAA family ATPase | |||
| plasmid pSCU-175-1 | ||||
| 26325 | 102 aa hypothetical protein | |||
| 26330 | M | M.Sso866ORF27155P (100% identity) | M.EcoSCU175ORF26330P | |
| 26335 | 73 aa hypothetical protein | |||
| plasmid pSCU-175-2 | ||||
| 27020 | 102 aa hypothetical protein | |||
| 27025 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoSCU175ORF27025P |
| 27030 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22480 | HNH endonuclease | |||
| 22485 | R | EcoSP46McrBP (100% identity) | EcoSCU175McrBP | |
| 22490 | R | EcoSP5McrCP (100% identity) | EcoSCU175McrCP | |
| 22495 | 128 aa hypothetical protein | |||