Escherichia coli NMBU-W13E19 |
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Putative Escherichia coli NMBU-W13E19 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 30302
| Sequence length: | GenBank #: | |
| Chromosome: | 5,127,396 bp | CP043406 |
| plasmid pNMBU-W13E19_01: | 122,112 bp | CP043407 |
| plasmid pNMBU-W13E19_02: | 67,044 bp | CP043408 |
REBASE acronym: EcoW13E19
Org_num: 40003
All begin FZN32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13050 | endoribonuclease SymE | |||
| 13055 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoW13E19ORF13060P |
| 13060 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoW13E19ORF13060P |
| ??? | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoW13E19ORF13060P |
| 13070 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1160 | phosphohydrolase | |||
| 1165 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.EcoW13E19DcmP |
| 1170 | V | V.Ecostr9DcmP (74% identity) | V.EcoW13E19DcmP | |
| 1175 | drug/metabolite exporter YedA | |||
| 4880 | 73 aa hypothetical protein | |||
| 4900 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoW13E19ORF4900P |
| 4905 | TrmB family transcriptional regulator | |||
| 5825 | NinE family protein | |||
| 5830 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoW13E19ORF5830P |
| 5835 | recombination protein NinB | |||
| 18465 | cell division protein DamX | |||
| 18470 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoW13E19DamP |
| 18475 | ribulose-phosphate 3-epimerase | |||
| 19000 | DUF2556 domain-containing protein | |||
| 19005 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoW13E19ORF19005P |
| 19010 | DNA-binding transcriptional regulator Fis | |||
| plasmid pNMBU-W13E19_01 | ||||
| 25460 | IS1 family transposase | |||
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.EcoW13E19ORF25465P |
| 25470 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoW13E19ORF25465P |
| 25475 | resolvase | |||
| 25990 | 73 aa hypothetical protein | |||
| 25995 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoW13E19ORF25995P |
| 26000 | 102 aa hypothetical protein | |||
| plasmid pNMBU-W13E19_02 | ||||
| 26245 | 59 aa hypothetical protein | |||
| 26250 | M | M.Xca80ORFEP (100% identity) | M.EcoW13E19ORF26250P | |
| 26255 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13040 | R | SenHNK130McrCP (100% identity) | EcoW13E19McrCP | |
| 13045 | R | SenHNK130McrBP (100% identity) | EcoW13E19McrBP | |
| 13050 | endoribonuclease SymE | |||
| 13065 | type I restriction-modification system | |||
| 13070 | R | Ssp28760MrrP (100% identity) | EcoW13E19MrrP | |
| 13075 | GTPase | |||