Shewanella oneidensis MR-1 |
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Putative Shewanella oneidensis MR-1 RM systems
Ref: Lebov,J.F. et al. unpublished
REBASE ref # 30693
Complete sequence: 4,972,338 bp
GenBank #: CP053946
REBASE acronym: SonMR1
Org_num: 41188
All begin HRJ35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 255 | DUF3800 domain-containing protein | |||
| 260 | S | S.SonIV (100% identity) | TACNNNNNNGTNGT | S.SonMR1ORF265P |
| 265 | M | M.SonIV (100% identity) | TACNNNNNNGTNGT | M.SonMR1ORF265P |
| 270 | Fic family protein | |||
| 275 | R | SonIVP (100% identity) | TACNNNNNNGTNGT | SonMR1ORF265P |
| 280 | IS3-like element ISSod2 family transposase | |||
| 4410 | M48 family metallopeptidase | |||
| 4415 | R | SonIIP (100% identity) | TGAYNNNNNNTGAC | SonMR1ORF4430P |
| 4420 | virulence protein RhuM/Fic/DOC family protein | |||
| 4425 | S | S.SonII (100% identity) | TGAYNNNNNNTGAC | S.SonMR1ORF4430P |
| 4430 | M | M.SonII (100% identity) | TGAYNNNNNNTGAC | M.SonMR1ORF4430P |
| 4435 | inovirus-type Gp2 protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3985 | AAA family ATPase | |||
| ??? | M | M.SonDamP (99% identity) | GATC | M.SonMR1DamP |
| 3995 | DUF2970 domain-containing protein | |||
| 5855 | 73 aa hypothetical protein | |||
| 5860 | M | M.SonORF690P (100% identity) | M.SonMR1ORF5860P | |
| 5865 | 134 aa hypothetical protein | |||
| 9355 | IS1595-like element ISSod11 family transposase | |||
| 9360 | M | M.SonIII (100% identity) | GACNNNNTGC | M.SonMR1ORF9360P |
| 9365 | AAA family ATPase | |||
| 9370 | 220 aa hypothetical protein | |||
| 9375 | S | S.SonORFIII (100% identity) | GACNNNNTGC | S.SonMR1ORF9360P |
| 9380 | protein kinase | |||
| 16550 | 115 aa hypothetical protein | |||
| 16555 | M | M.SonORF3004P (100% identity) | M.SonMR1ORF16555P | |
| 16560 | 165 aa hypothetical protein | |||
| 16560 | 165 aa hypothetical protein | |||
| 16565 | M | M.SonORF3006P (100% identity) | M.SonMR1ORF16565P | |
| 16570 | 137 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4355 | Fic family protein | |||
| 4360 | R | SonORF368P (100% identity) | SonMR1ORF4360P | |
| 4365 | LysR family transcriptional regulator | |||