Escherichia coli O157:H7 F3113 |
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Putative Escherichia coli O157:H7 F3113 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,454,413 bp | CP038374 |
| plasmid pF3113-1: | 91,076 bp | CP038375 |
REBASE acronym: EcoF3113
Org_num: 40025
All begin E3160_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | endoribonuclease SymE | |||
| 3380 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF3113ORF3385P |
| 3385 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF3113ORF3385P |
| 3390 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF3113ORF3385P |
| 3395 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3095 | transposase | |||
| 3100 | R | Ecos1613ORF26795P (100% identity) | EcoF3113ORF3100P | |
| 3105 | N-acetylneuraminate epimerase | |||
| 13745 | 61 aa hypothetical protein | |||
| 13760 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF3113ORF13760P | |
| 13765 | TrmB family transcriptional regulator | |||
| 16825 | drug/metabolite exporter YedA | |||
| 16830 | V | V.EcoG5101DcmP (100% identity) | V.EcoF3113DcmP | |
| 16835 | M | M.EcoG5101DcmP (100% identity) | CCWGG | M.EcoF3113DcmP |
| 16840 | phosphohydrolase | |||
| 18410 | Shiga toxin Stx2 subunit A | |||
| 18430 | M | M.Eco279ORF2914P (99% identity) | M.EcoF3113ORF18430P | |
| 18435 | TrmB family transcriptional regulator | |||
| 18470 | LexA family transcriptional regulator | |||
| 18475 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoF3113ORF18475P |
| 18480 | PerC family transcriptional regulator | |||
| 24640 | DNA-binding transcriptional regulator Fis | |||
| 24645 | M | M.EcoG5101ORF563P (39% identity) | M.EcoF3113ORF24645P | |
| 24650 | 73 aa hypothetical protein | |||
| 25155 | ribulose-phosphate 3-epimerase | |||
| 25160 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF3113DamP |
| 25165 | cell division protein DamX | |||
| plasmid pF3113-1 | ||||
| 27925 | 73 aa hypothetical protein | |||
| 27930 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF3113ORF27930P | |
| 27935 | 101 aa hypothetical protein | |||