Escherichia coli O157:H7 F6294 |
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Putative Escherichia coli O157:H7 F6294 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,593,140 bp | CP038372 |
| plasmid pF6294-1: | 92,725 bp | CP038373 |
REBASE acronym: EcoF6294
Org_num: 40026
All begin E3161_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25560 | DUF262 domain-containing protein | |||
| 25565 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF6294ORF25570P |
| 25570 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF6294ORF25570P |
| 25575 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF6294ORF25570P |
| 25580 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF6294DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF6294ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 8870 | recombination protein NinB | |||
| 8875 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF6294ORF8875P |
| 8880 | NinE family protein | |||
| 10335 | phosphohydrolase | |||
| 10340 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF6294DcmP |
| 10345 | V | V.EcosPA8DcmP (100% identity) | V.EcoF6294DcmP | |
| 10350 | drug/metabolite exporter YedA | |||
| 11085 | TrmB family transcriptional regulator | |||
| 11090 | M | M.EcoZ1836ORF11435P (100% identity) | M.EcoF6294ORF11090P | |
| 11110 | Shiga toxin Stx2 subunit A | |||
| 14515 | DUF1367 family protein | |||
| 14520 | R | Ecos15739ORF2910P (100% identity) | EcoF6294ORF14520P | |
| 14525 | 123 aa hypothetical protein | |||
| 15640 | DUF1737 domain-containing protein | |||
| 15645 | M | M.EcoTWORF1742P (100% identity) | M.EcoF6294ORF15645P | |
| 15650 | TrmB family transcriptional regulator | |||
| 16035 | 61 aa hypothetical protein | |||
| 16050 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF6294ORF16050P | |
| 16055 | TrmB family transcriptional regulator | |||
| 19120 | NinE family protein | |||
| 19125 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoF6294ORF19120P |
| 19130 | recombination protein NinB | |||
| 25800 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF6294ORF25800P |
| 25805 | DEAD/DEAH box helicase | |||
| 25835 | N-acetylneuraminate epimerase | |||
| 25840 | R | Ecos1613ORF26795P (100% identity) | EcoF6294ORF25840P | |
| 25845 | transposase | |||
| plasmid pF6294-1 | ||||
| 28915 | 59 aa hypothetical protein | |||
| 28920 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF6294ORF28920P | |
| 28925 | 73 aa hypothetical protein | |||