Escherichia coli O157:H7 F7349 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 F7349 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,519,312 bp | CP038363 |
| plasmid pF7349-1: | 92,700 bp | CP038364 |
REBASE acronym: EcoF7349
Org_num: 40029
All begin E4U70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19515 | 64 aa hypothetical protein | |||
| 19520 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoF7349ORF19520P |
| 19525 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoF7349ORF19520P |
| 19530 | DUF4433 domain-containing protein | |||
| 19535 | Appr-1-p processing protein | |||
| 19540 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoF7349ORF19520P |
| 19545 | M48 family peptidase | |||
| 24900 | DUF262 domain-containing protein | |||
| 24905 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF7349ORF24910P |
| 24910 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF7349ORF24910P |
| 24915 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF7349ORF24910P |
| 24920 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF7349DamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF7349ORF2870P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 8895 | recombination protein NinB | |||
| 8900 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF7349ORF8900P |
| 8905 | NinE family protein | |||
| 10375 | phosphohydrolase | |||
| 10380 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF7349DcmP |
| 10385 | V | V.EcosPA8DcmP (100% identity) | V.EcoF7349DcmP | |
| 10390 | drug/metabolite exporter YedA | |||
| 13600 | 81 aa hypothetical protein | |||
| 13605 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoF7349ORF13605P | |
| 13610 | 329 aa hypothetical protein | |||
| 13615 | R | Ecos15739ORF2910P (100% identity) | EcoF7349ORF13605P | |
| 13620 | DUF1367 family protein | |||
| 15180 | 61 aa hypothetical protein | |||
| 15195 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF7349ORF15195P | |
| 15200 | TrmB family transcriptional regulator | |||
| 18240 | NinE family protein | |||
| 18245 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoF7349ORF18245P |
| 18250 | recombination protein NinB | |||
| 25140 | RM | EcoOS292II (100% identity) | GAAABCC | EcoF7349ORF25140P |
| 25145 | DEAD/DEAH box helicase | |||
| 25175 | N-acetylneuraminate epimerase | |||
| 25180 | R | Ecos1613ORF26795P (100% identity) | EcoF7349ORF25180P | |
| 25185 | transposase | |||
| plasmid pF7349-1 | ||||
| 28260 | 59 aa hypothetical protein | |||
| 28265 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF7349ORF28265P | |
| 28270 | 73 aa hypothetical protein | |||