Escherichia coli O157:H7 Gim1-1 |
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Putative Escherichia coli O157:H7 Gim1-1 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,408,816 bp | CP038344 |
| plasmid pGM11-1: | 92,577 bp | CP038345 |
REBASE acronym: EcoGim11
Org_num: 40038
All begin E4U63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24040 | DUF262 domain-containing protein | |||
| 24045 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoGim11ORF24050P |
| 24050 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoGim11ORF24050P |
| 24055 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoGim11ORF24050P |
| 24060 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoGim11DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoGim11ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 9685 | recombination protein NinB | |||
| 9690 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoGim11ORF9690P |
| 9695 | NinE family protein | |||
| 10570 | phosphohydrolase | |||
| 10575 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoGim11DcmP |
| 10580 | V | V.EcosPA8DcmP (100% identity) | V.EcoGim11DcmP | |
| 10585 | drug/metabolite exporter YedA | |||
| 14160 | TrmB family transcriptional regulator | |||
| 14165 | M | M.EcoNE92ORF14960P (100% identity) | M.EcoGim11ORF14165P | |
| 14180 | 61 aa hypothetical protein | |||
| 22375 | toxin | |||
| 22380 | M | M.Ecos32ORF15460P (100% identity) | M.EcoGim11ORF22380P | |
| 22385 | R | Ecos32ORF15460P (100% identity) | EcoGim11ORF22380P | |
| 22395 | glutamate-5-semialdehyde dehydrogenase | |||
| 24285 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoGim11ORF24285P |
| 24290 | DEAD/DEAH box helicase | |||
| 24320 | N-acetylneuraminate epimerase | |||
| 24325 | R | EcoNE92ORF24295P (100% identity) | EcoGim11ORF24325P | |
| 24330 | transposase | |||
| plasmid pGM11-1 | ||||
| 27480 | 101 aa hypothetical protein | |||
| 27485 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoGim11ORF27485P | |
| 27490 | 73 aa hypothetical protein | |||