Bifidobacterium stellenboschense DSM 23968 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bifidobacterium stellenboschense DSM 23968 RM systems
Ref: Milani,C. et al. Appl. Environ. Microbiol. 80 (20), 6290-6302 (2014)
REBASE ref # 18068
Contig set: 2,812,864 bp
GenBank #: JGZP00000000 (NZ_JGZP00000000)
REBASE acronym: Bst23968
Org_num: 39813
All begin BSTEL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2016 | type I restriction system adenine | |||
| 2017 | M | M.BpaUis4EORF1752P (96% identity) | M.Bst23968ORF2017P | |
| 2018 | S | S.Bre23975ORFDP (52% identity) | S.Bst23968ORF2017P | |
| 2019 | R | BpaUis4EORF1752P (91% identity) | Bst23968ORF2017P | |
| 2020 | 68 aa hypothetical protein | |||
| 338 | 50 aa hypothetical protein | |||
| 339 | R | Blo10050ORF117P (91% identity) | Bst23968ORF340P | |
| 340 | M | M.BdeN8ORF495P (90% identity) | M.Bst23968ORF340P | |
| 341 | S | S.XmaDY64ORF12075P (19% identity) | S1.Bst23968ORF340P | |
| 342 | S | S.EsaB007ORF62960P (14% identity) | S2.Bst23968ORF340P | |
| 343 | invertase | |||
| 1260 | ATP-dependent Clp protease proteolytic subunit | |||
| 1261 | R | Bbi23969ORFBP (81% identity) | Bst23968ORF1271P | |
| 1262 | AAA domain protein | |||
| 1263 | 125 aa hypothetical protein | |||
| 1264 | XRE family transcriptional regulator | |||
| 1265 | toxin-antitoxin system, toxin | |||
| 1266 | 223 aa hypothetical protein | |||
| 1267 | 87 aa hypothetical protein | |||
| 1268 | 49 aa hypothetical protein | |||
| 1269 | 183 aa hypothetical protein | |||
| 1270 | S | S.BroRST9ORF10105P (64% identity) | S.Bst23968ORF1271P | |
| 1271 | M | M.Bra100688ORF318P (91% identity) | M.Bst23968ORF1271P | |
| 1272 | chloride channel protein | |||
| 807 | ATPase | |||
| 808 | R | Ema25476ORFBP (50% identity) | Bst23968ORF810P | |
| 809 | S | S.ScoHDE06ORF11870P (41% identity) | S.Bst23968ORF810P | |
| 810 | M | M.Ema25476ORFBP (63% identity) | M.Bst23968ORF810P | |
| 811 | ATPase | |||
| 292 | transcriptional regulator | |||
| 293 | R | Bgo2034BORF374P (71% identity) | Bst23968ORF294P | |
| 294 | M | M.Bca819ORF4995P (79% identity) | M.Bst23968ORF294P | |
| ??? | S | S.BspTRE1ORF1395P (73% identity) | S.Bst23968ORF294P | |
| 296 | AAA domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | biotin-(acetyl-CoA carboxylase) ligase | |||
| 15 | RM | BpaUis4EORF248P (92% identity) | Bst23968ORF15P | |
| 17 | antitoxin PHD | |||
| 1465 | ATP-binding protein | |||
| 1466 | RM | Bca31790ORF3605P (68% identity) | Bst23968ORF1466P | |
| 1467 | 566 aa hypothetical protein | |||
| 1338 | translation elongation factor Tu | |||
| 1339 | RM | BimTam1GORF2149P (87% identity) | Bst23968ORF1339P | |
| 1340 | endonuclease | |||
| 503 | 268 aa hypothetical protein | |||
| 504 | M | M.BpaUis4EORF640P (94% identity) | M.Bst23968ORF504P | |
| 505 | R | BpaUis4EORF640P (91% identity) | Bst23968ORF504P | |
| 506 | 81 aa hypothetical protein | |||
| 1808 | 572 aa hypothetical protein | |||
| 1809 | R | Bae26737ORFEP (64% identity) | Bst23968ORF1810P | |
| 1810 | M | M.Bae26737ORFEP (37% identity) | M.Bst23968ORF1810P | |
| 1811 | transposase subunit B | |||
| 1947 | ATPase AAA | |||
| 1948 | M | M.BmaUis1BORF338P (85% identity) | M.Bst23968ORF1948P | |
| 1949 | R | Ban20098ORF1154P (81% identity) | Bst23968ORF1948P | |
| 1950 | short-chain dehydrogenase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 336 | 100 aa hypothetical protein | |||
| 337 | R | Eba2226MrrP (41% identity) | Bst23968MrrP | |
| 338 | 50 aa hypothetical protein | |||
| 1802 | glycosyl hydrolase family 25 | |||
| 1803 | R | CspKC1668McrCP (23% identity) | Bst23968McrCP | |
| 1804 | R | Sin196McrBP (31% identity) | Bst23968McrBP | |
| 1805 | bifunctional urease subunit gamma/beta | |||