Bifidobacterium callitrichidarum TRI 5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bifidobacterium callitrichidarum TRI 5 RM systems
Ref: Modesto,M. et al. Int. J. Syst. Evol. Microbiol. 68 (1), 141-148 (2018)
REBASE ref # 30243
Contig set: 3,120,708 bp
GenBank #: QFFM00000000 (NZ_QFFM00000000)
REBASE acronym: Bca31790
Org_num: 39831
All begin DF196_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4225 | integrase | |||
| 4230 | S | S2.Bad2019ORFDP (27% identity) | S2.Bca31790ORF4240P | |
| 4235 | S | S1.Bps11956ORF3870P (52% identity) | S1.Bca31790ORF4240P | |
| 4240 | M | M.BimTam1GORF1747P (99% identity) | M.Bca31790ORF4240P | |
| 4245 | R | BspTREDORF1520P (94% identity) | Bca31790ORF4240P | |
| 4250 | two-component sensor histidine kinase | |||
| 7440 | argininosuccinate lyase | |||
| 7445 | R | BspTREHORF9465P (94% identity) | Bca31790ORF7465P | |
| 7450 | cell filamentation protein Fic | |||
| 7455 | 62 aa hypothetical protein | |||
| 7460 | S | S.Bva10BORF2161P (61% identity) | S1.Bca31790ORF7465P | |
| 7465 | M | M.BspTREHORF9465P (96% identity) | M.Bca31790ORF7465P | |
| 7475 | S | S3.BpaUis4EORF397P (53% identity) | S2.Bca31790ORF7465P | |
| 7480 | site-specific integrase | |||
| 7485 | S | S1.Bca31790ORF7465P (40% identity) | S3.Bca31790ORF7465P | |
| 7490 | argininosuccinate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6770 | 80 aa hypothetical protein | |||
| 6775 | S | S.BimTam1GORF499P (34% identity) | S2.Bca31790ORF6785P | |
| 6780 | S | S1.Mba108610ORFLP (33% identity) | S1.Bca31790ORF6785P | |
| 6785 | RM | LmuMORFFP (81% identity) | Bca31790ORF6785P | |
| 6790 | kinase | |||
| 2065 | toxin-antitoxin system HicB family antitoxin | |||
| 2070 | RM | BloF2ORF5335P (64% identity) | Bca31790ORF2070P | |
| 2075 | IS1595 family transposase | |||
| 2080 | type II toxin-antitoxin system antitoxin, | |||
| 2085 | RM | Fba500ORF3465P (77% identity) | Bca31790ORF2085P | |
| 2090 | 601 aa hypothetical protein | |||
| 3600 | BREX system P-loop protein BrxC | |||
| 3605 | RM | Bbi23969ORFAP (69% identity) | Bca31790ORF3605P | |
| 3610 | AAA+ family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4390 | nucleotidyltransferase | |||
| 4395 | R | Bra100688ORF2195P (99% identity) | Bca31790ORF4400P | |
| 4400 | M | M.Bra100688ORF2195P (100% identity) | M.Bca31790ORF4400P | |
| 4405 | 594 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 490 | cell filamentation protein Fic | |||
| 495 | R | BspTKUORF615P (74% identity) | Bca31790ORF495P | |
| 500 | (deoxy)nucleoside triphosphate | |||