Escherichia coli O157:H7 NE122 |
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Putative Escherichia coli O157:H7 NE122 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,452,405 bp | CP038319 |
| plasmid pNE122-1: | 95,338 bp | CP038320 |
REBASE acronym: EcoNE122
Org_num: 40044
All begin E3167_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17195 | 64 aa hypothetical protein | |||
| 17200 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoNE122ORF17200P |
| 17205 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoNE122ORF17200P |
| 17210 | DUF4433 domain-containing protein | |||
| 17215 | Appr-1-p processing protein | |||
| 17220 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | EcoNE122ORF17200P |
| 17225 | M48 family peptidase | |||
| 24450 | DUF262 domain-containing protein | |||
| 24455 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoNE122ORF24460P |
| 24460 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoNE122ORF24460P |
| 24465 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoNE122ORF24460P |
| 24470 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNE122DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoNE122ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 9865 | recombination protein NinB | |||
| 9870 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoNE122ORF9870P |
| 9875 | NinE family protein | |||
| 10770 | phosphohydrolase | |||
| 10775 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNE122DcmP |
| 10780 | V | V.EcosPA8DcmP (100% identity) | V.EcoNE122DcmP | |
| 10785 | drug/metabolite exporter YedA | |||
| 15165 | 61 aa hypothetical protein | |||
| 15180 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoNE122ORF15180P | |
| 15185 | TrmB family transcriptional regulator | |||
| 24240 | RusA family crossover junction | |||
| 24245 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.EcoNE122ORF24245P |
| 24250 | helix-turn-helix domain-containing protein | |||
| 24710 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoNE122ORF24710P |
| 24715 | DEAD/DEAH box helicase | |||
| plasmid pNE122-1 | ||||
| 27840 | 101 aa hypothetical protein | |||
| 27845 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoNE122ORF27845P | |
| 27850 | 73 aa hypothetical protein | |||