Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Gull_ST-29 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Gull_ST-29 RM systems
Ref: Naushad,S. et al. unpublished
REBASE ref # 30679
| Sequence length: | GenBank #: | |
| Chromosome: | 4,879,541 bp | CP051286 |
| plasmid pST29-94038: | 94,272 bp | CP051287 |
REBASE acronym: SenST29
Org_num: 41138
All begin G4F88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3990 | endoribonuclease SymE | |||
| 3995 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST29ORF4000P |
| 4000 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenST29ORF4000P |
| 4005 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST29ORF4000P |
| 4010 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST29DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 3840 | AAA family ATPase | |||
| 3845 | RM | StyUK1IV (100% identity) | GATCAG | SenST29ORF3845P |
| 3850 | BREX system P-loop protein BrxC | |||
| 14325 | drug/metabolite exporter YedA | |||
| 14330 | V | V.StyUK1DcmP (100% identity) | V.SenST29DcmP | |
| 14335 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST29DcmP |
| 14340 | phosphohydrolase | |||
| 14570 | RusA family crossover junction | |||
| 14575 | M | M.StyUK1V (100% identity) | GATC | M.SenST29ORF14575P |
| 14580 | PerC family transcriptional regulator | |||
| 17890 | DUF550 domain-containing protein | |||
| 17895 | M | M.Sens29958ORF6205P (100% identity) | M.SenST29ORF17895P | |
| 17900 | ead/Ea22-like family protein | |||
| 21730 | DNA-binding transcriptional regulator Fis | |||
| 21735 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST29ORF21735P |
| 21740 | DUF2556 family protein | |||
| plasmid pST29-94038 | ||||
| 24045 | 73 aa hypothetical protein | |||
| 24050 | M | M.StyUK1ORFAP (100% identity) | M.SenST29ORF24050P | |
| 24055 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6180 | MFS transporter | |||
| 6185 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST29ORF6185P |
| 6190 | R | StyUK1IP (99% identity) | CAGAG | SenST29ORF6185P |
| 6195 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4005 | type I restriction-modification system | |||
| 4010 | R | StyUK1MrrP (100% identity) | SenST29MrrP | |
| 4015 | BrnT family toxin | |||