Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Gull_ST-32 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Gull_ST-32 RM systems
Ref: Naushad,S. et al. unpublished
REBASE ref # 30679
Complete sequence: 4,920,253 bp
GenBank #: CP051284
REBASE acronym: SenST32
Org_num: 41139
All begin G4F89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20360 | restriction endonuclease | |||
| 20365 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST32ORF20370P |
| 20370 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenST32ORF20370P |
| 20375 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST32ORF20370P |
| 20380 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST32DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST32ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6140 | ead/Ea22-like family protein | |||
| 6145 | M | M.Sens29958ORF6205P (100% identity) | M.SenST32ORF6145P | |
| 6150 | DUF550 domain-containing protein | |||
| 9460 | PerC family transcriptional regulator | |||
| 9465 | M | M.StyUK1V (100% identity) | GATC | M.SenST32ORF9465P |
| 9470 | RusA family crossover junction | |||
| 9700 | phosphohydrolase | |||
| 9705 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST32DcmP |
| 9710 | V | V.StyUK1DcmP (100% identity) | V.SenST32DcmP | |
| 9715 | drug/metabolite exporter YedA | |||
| 20520 | BREX system P-loop protein BrxC | |||
| 20525 | RM | StyUK1IV (100% identity) | GATCAG | SenST32ORF20525P |
| 20530 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17845 | 33 aa hypothetical protein | |||
| 17850 | R | StyUK1IP (99% identity) | CAGAG | SenST32ORF17855P |
| 17855 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST32ORF17855P |
| 17860 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20355 | BrnT family toxin | |||
| 20360 | R | StyUK1MrrP (100% identity) | SenST32MrrP | |
| 20365 | type I restriction-modification system | |||