Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Sparrow_ST-87 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1_WB_Sparrow_ST-87 RM systems
Ref: Naushad,S. et al. unpublished
REBASE ref # 30679
| Sequence length: | GenBank #: | |
| Chromosome: | 4,857,600 bp | CP051276 |
| plasmid pST87-92921: | 93,100 bp | CP051277 |
REBASE acronym: SenST87
Org_num: 41142
All begin G4F92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3990 | endoribonuclease SymE | |||
| 3995 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST87ORF4000P |
| 4000 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenST87ORF4000P |
| 4005 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | SenST87ORF4000P |
| 4010 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST87DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 3840 | AAA family ATPase | |||
| 3845 | RM | StyUK1IV (100% identity) | GATCAG | SenST87ORF3845P |
| 3850 | BREX system P-loop protein BrxC | |||
| 14655 | drug/metabolite exporter YedA | |||
| 14660 | V | V.StyUK1DcmP (100% identity) | V.SenST87DcmP | |
| 14665 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST87DcmP |
| 14670 | phosphohydrolase | |||
| 14900 | RusA family crossover junction | |||
| 14905 | M | M.StyUK1V (100% identity) | GATC | M.SenST87ORF14905P |
| 14910 | PerC family transcriptional regulator | |||
| 18210 | 92 aa hypothetical protein | |||
| 18215 | M | M.StyTORF1914P (100% identity) | M.SenST87ORF18215P | |
| 18220 | ead/Ea22-like family protein | |||
| 21850 | DNA-binding transcriptional regulator Fis | |||
| 21855 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST87ORF21855P |
| 21860 | DUF2556 family protein | |||
| plasmid pST87-92921 | ||||
| 24080 | 73 aa hypothetical protein | |||
| 24085 | M | M.StyUK1ORFAP (100% identity) | M.SenST87ORF24085P | |
| 24090 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6495 | MFS transporter | |||
| 6500 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST87ORF6500P |
| 6505 | R | StyUK1IP (99% identity) | CAGAG | SenST87ORF6500P |
| 6510 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4005 | type I restriction-modification system | |||
| 4010 | R | StyUK1MrrP (100% identity) | SenST87MrrP | |
| 4015 | BrnT family toxin | |||