Salmonella enterica subsp. enterica serovar Worthington OLF-FSR1_WB_Partridge_SW-37 |
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Putative Salmonella enterica subsp. enterica serovar Worthington OLF-FSR1_WB_Partridge_SW-37 RM systems
Ref: Naushad,S. et al. unpublished
REBASE ref # 30679
| Sequence length: | GenBank #: | |
| Chromosome: | 4,697,589 bp | CP051273 |
| plasmid pSW37-267109: | 267,333 bp | CP051274 |
REBASE acronym: SenSW37
Org_num: 41157
All begin G4F93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19155 | restriction endonuclease | |||
| 19160 | R | StyUK1IIP (100% identity) | CNGANNNNNNNNTGCG | SenSW37ORF19165P |
| 19165 | M | M.StyUK1II (100% identity) | CNGANNNNNNNNTGCG | M.SenSW37ORF19165P |
| 19170 | S | S.SenSW70ORF19425P (98% identity) | CNGANNNNNNNNTGCG | S.SenSW37ORF19165P |
| 19175 | endoribonuclease SymE | |||
| 19390 | DUF945 domain-containing protein | |||
| 19395 | R | SenSW70ORF19650P (99% identity) | SenSW37ORF19375P | |
| 19400 | M | M.SenSW70ORF19650P (99% identity) | M.SenSW37ORF19375P | |
| 19405 | S | S.SenSW70ORF19650P (41% identity) | S1.SenSW37ORF19375P | |
| 19410 | S | S.SenSW70ORF19650P (54% identity) | S2.SenSW37ORF19375P | |
| 19415 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.StyTDamP (100% identity) | GATC | M.SenSW37DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSW37ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 5705 | DUF4060 family protein | |||
| 5710 | M | M.SenSW70ORF5830P (100% identity) | M.SenSW37ORF5710P | |
| 5715 | YqaJ viral recombinase family protein | |||
| 5795 | ead/Ea22-like family protein | |||
| 5800 | M | M.Sen39540ORF13495P (99% identity) | M.SenSW37ORF5800P | |
| 5805 | DUF550 domain-containing protein | |||
| 8990 | phosphohydrolase | |||
| 8995 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSW37DcmP |
| 9000 | V | V.StyUK1DcmP (100% identity) | V.SenSW37DcmP | |
| 9005 | drug/metabolite exporter YedA | |||
| 13035 | LexA family transcriptional regulator | |||
| 13040 | M | M.SenSW70ORF13270P (99% identity) | M.SenSW37ORF13040P | |
| 13045 | phage N-6-adenine-methyltransferase | |||
| 13040 | DNA cytosine methyltransferase | |||
| 13045 | M | M.SenS710ORF8015P (97% identity) | M.SenSW37ORF13045P | |
| 13050 | PerC family transcriptional regulator | |||
| 19295 | YebC/PmpR family DNA-binding transcriptional | |||
| 19300 | R | SenSW70ORF19560P (99% identity) | SenSW37ORF19300P | |
| 19305 | 64 aa hypothetical protein | |||
| 19420 | 5-nucleotidase | |||
| 19425 | R | SenSW70ORF19670P (99% identity) | SenSW37ORF19425P | |
| 19430 | helix-turn-helix transcriptional regulator | |||
| plasmid pSW37-267109 | ||||
| 22610 | 55 aa hypothetical protein | |||
| 22615 | M | M.Eco2673ORF25540P (99% identity) | M.SenSW37ORF22615P | |
| 22620 | thermonuclease family protein | |||
| 23085 | 106 aa hypothetical protein | |||
| 23090 | M | M.SmapR478ORF272P (100% identity) | M.SenSW37ORF23090P | |
| 23095 | 202 aa hypothetical protein | |||
| 23215 | DNA-binding protein | |||
| 23220 | M | M.Eco2673ORF25775P (99% identity) | M.SenSW37ORF23220P | |
| 23225 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16980 | 33 aa hypothetical protein | |||
| 16985 | R | SenSL0048ORF4675P (100% identity) | CAGAG | SenSW37ORF16990P |
| 16990 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSW37ORF16990P |
| 16995 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19150 | BrnT family toxin | |||
| 19155 | R | StyUK1MrrP (100% identity) | SenSW37MrrP | |
| 19160 | type I restriction-modification system | |||